KEGG   Gordonia sp. 135: GKZ92_15665
Entry
GKZ92_15665       CDS       T06305                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
god  Gordonia sp. 135
Brite
KEGG Orthology (KO) [BR:god00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:god03032]
    GKZ92_15665
   03036 Chromosome and associated proteins [BR:god03036]
    GKZ92_15665
   03400 DNA repair and recombination proteins [BR:god03400]
    GKZ92_15665
DNA replication proteins [BR:god03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    GKZ92_15665
Chromosome and associated proteins [BR:god03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    GKZ92_15665
DNA repair and recombination proteins [BR:god03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      GKZ92_15665
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HC2
Other DBs
NCBI-ProteinID: QGP88949
UniProt: A0A6I5ZGV3
LinkDB
Position
complement(3456150..3456776)
AA seq 208 aa
MNKAELIDELTKKLDADRKTATEAVELVVDTIVRAVHKGESVTITGFGVFEKRKRAPRVA
RNPRTGETVKVRATSVPAFRPGAQFKAVVAGKQKLAASGPAVKRGSGTTTTAAKKAAPAK
KTAAKKATPAKKTAAKKAPAKTTAAKKTTAAKKAAPAKKTTAAKKTTTAAKKTTAAKKAA
PAKKTAAKKAPAKKTAAKKAPAKKSTRR
NT seq 627 nt   +upstreamnt  +downstreamnt
atgaacaaggcggagctcatcgatgagctgaccaagaagctcgacgcggatcgcaagact
gcgactgaagccgtcgagctcgtcgtcgacacgatcgttcgcgcggtccacaagggcgag
agcgtgacgatcaccggcttcggtgttttcgagaagcggaagcgcgcgccgcgcgtggct
cgcaacccgcgcacgggcgagaccgtgaaggtccgtgctacttcggttcccgcgttccgt
ccgggcgctcagttcaaggccgtcgtggccggtaagcagaagcttgctgccagcggtccg
gctgtgaagcgcggcagcggcaccaccaccacggcggccaagaaggcggccccggcgaag
aagaccgcggcaaagaaggccaccccggccaagaagaccgcggccaagaaggcgccggcc
aagaccacggcagcgaagaagaccaccgcggccaagaaggctgcgccggcgaagaagacg
accgcagcaaagaagacgacgaccgcggcgaagaagaccaccgcggccaagaaggctgcg
ccggcgaagaagaccgcggcaaagaaggctccggccaagaagactgcggccaagaaggct
ccggccaagaagtcgacgcgtcgctga

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