Gordonia sp. 135: GKZ92_15665
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Entry
GKZ92_15665 CDS
T06305
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
god
Gordonia sp. 135
Brite
KEGG Orthology (KO) [BR:
god00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
god03032
]
GKZ92_15665
03036 Chromosome and associated proteins [BR:
god03036
]
GKZ92_15665
03400 DNA repair and recombination proteins [BR:
god03400
]
GKZ92_15665
DNA replication proteins [BR:
god03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GKZ92_15665
Chromosome and associated proteins [BR:
god03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GKZ92_15665
DNA repair and recombination proteins [BR:
god03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GKZ92_15665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HC2
Motif
Other DBs
NCBI-ProteinID:
QGP88949
UniProt:
A0A6I5ZGV3
LinkDB
All DBs
Position
complement(3456150..3456776)
Genome browser
AA seq
208 aa
AA seq
DB search
MNKAELIDELTKKLDADRKTATEAVELVVDTIVRAVHKGESVTITGFGVFEKRKRAPRVA
RNPRTGETVKVRATSVPAFRPGAQFKAVVAGKQKLAASGPAVKRGSGTTTTAAKKAAPAK
KTAAKKATPAKKTAAKKAPAKTTAAKKTTAAKKAAPAKKTTAAKKTTTAAKKTTAAKKAA
PAKKTAAKKAPAKKTAAKKAPAKKSTRR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcggagctcatcgatgagctgaccaagaagctcgacgcggatcgcaagact
gcgactgaagccgtcgagctcgtcgtcgacacgatcgttcgcgcggtccacaagggcgag
agcgtgacgatcaccggcttcggtgttttcgagaagcggaagcgcgcgccgcgcgtggct
cgcaacccgcgcacgggcgagaccgtgaaggtccgtgctacttcggttcccgcgttccgt
ccgggcgctcagttcaaggccgtcgtggccggtaagcagaagcttgctgccagcggtccg
gctgtgaagcgcggcagcggcaccaccaccacggcggccaagaaggcggccccggcgaag
aagaccgcggcaaagaaggccaccccggccaagaagaccgcggccaagaaggcgccggcc
aagaccacggcagcgaagaagaccaccgcggccaagaaggctgcgccggcgaagaagacg
accgcagcaaagaagacgacgaccgcggcgaagaagaccaccgcggccaagaaggctgcg
ccggcgaagaagaccgcggcaaagaaggctccggccaagaagactgcggccaagaaggct
ccggccaagaagtcgacgcgtcgctga
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