KEGG   Gordonia sp. 135: GKZ92_18240
Entry
GKZ92_18240       CDS       T06305                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
god  Gordonia sp. 135
Pathway
god03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:god00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GKZ92_18240 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:god03400]
    GKZ92_18240 (xth)
Enzymes [BR:god01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     GKZ92_18240 (xth)
DNA repair and recombination proteins [BR:god03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     GKZ92_18240 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: QGP89403
UniProt: A0A6I5ZHY4
LinkDB
Position
complement(4019627..4020502)
AA seq 291 aa
MRVATWNVNSVKQRIPRLLPWLDERRPDVVCLQETKLSDDAFHEVLGADLAERGYEIAHA
GQGQWNGVALLSRVGLEDVRVGFAGMPGYPTPETLEARAISAVCGGLRIHSLYVPNGRSP
DSDHYTYKLEWLAALAKAVADPSTTLLCGDMNIAPADADLFDPDAFAGHTHVTPPERAAL
AEFAALGLRDVVRDRWPDDRVFSYWDYRAGMFHKDLGMRIDLILAGESAAGRVEAAWIDR
KARKGSKPSDHAPVIVDLDEAPDGDIGPVVPPPSNPAKPGGAKVKLPQTPE
NT seq 876 nt   +upstreamnt  +downstreamnt
atgcgcgtcgcgacctggaacgtgaactcggtgaaacagcggattccgcgcctcctccca
tggctcgacgaacgtcgccccgacgtcgtctgcctgcaggagaccaagctctccgacgac
gccttccacgaggtcctcggcgccgatctcgccgaacgtggctacgagatcgcgcacgcg
gggcagggccagtggaacggtgtcgcgctgctctcgcgggtcgggctcgaggacgtgcgc
gtcggcttcgccggcatgccgggttatccgacgccggagacgctcgaggcccgcgcgatt
tctgcggtgtgcggcggtctgcgcatccactccctttacgtgccgaacggccgcagcccc
gactcggatcactacacgtacaaactcgaatggctcgccgctctcgcgaaggcggtcgcc
gacccgtcgacgacgctcctctgcggcgacatgaacatcgcgcccgccgacgcggatctg
ttcgatcccgacgccttcgccgggcacacgcacgtcacccctccggaacgtgccgcgctc
gccgagttcgcggcgctgggtctgcgcgacgtggtccgtgaccgctggccggatgaccgg
gtcttcagctactgggactaccgtgccggaatgttccacaaggacctgggcatgcggatc
gatctcatcctggcgggtgagtcggccgccggccgggtcgaggcggcctggatcgaccgc
aaggcgcgcaagggcagcaagcccagtgatcacgcgccggtcatcgtcgacctcgacgag
gcgcccgacggcgacatcggtccggtggtcccgccgccgtcgaatccggcgaaacccggt
ggcgcgaaggtgaaactgccccagaccccggagtga

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