Gordonia sp. 135: GKZ92_18240
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Entry
GKZ92_18240 CDS
T06305
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
god
Gordonia sp. 135
Pathway
god03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
god00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GKZ92_18240 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
god03400
]
GKZ92_18240 (xth)
Enzymes [BR:
god01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
GKZ92_18240 (xth)
DNA repair and recombination proteins [BR:
god03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GKZ92_18240 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QGP89403
UniProt:
A0A6I5ZHY4
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All DBs
Position
complement(4019627..4020502)
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AA seq
291 aa
AA seq
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MRVATWNVNSVKQRIPRLLPWLDERRPDVVCLQETKLSDDAFHEVLGADLAERGYEIAHA
GQGQWNGVALLSRVGLEDVRVGFAGMPGYPTPETLEARAISAVCGGLRIHSLYVPNGRSP
DSDHYTYKLEWLAALAKAVADPSTTLLCGDMNIAPADADLFDPDAFAGHTHVTPPERAAL
AEFAALGLRDVVRDRWPDDRVFSYWDYRAGMFHKDLGMRIDLILAGESAAGRVEAAWIDR
KARKGSKPSDHAPVIVDLDEAPDGDIGPVVPPPSNPAKPGGAKVKLPQTPE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgcgacctggaacgtgaactcggtgaaacagcggattccgcgcctcctccca
tggctcgacgaacgtcgccccgacgtcgtctgcctgcaggagaccaagctctccgacgac
gccttccacgaggtcctcggcgccgatctcgccgaacgtggctacgagatcgcgcacgcg
gggcagggccagtggaacggtgtcgcgctgctctcgcgggtcgggctcgaggacgtgcgc
gtcggcttcgccggcatgccgggttatccgacgccggagacgctcgaggcccgcgcgatt
tctgcggtgtgcggcggtctgcgcatccactccctttacgtgccgaacggccgcagcccc
gactcggatcactacacgtacaaactcgaatggctcgccgctctcgcgaaggcggtcgcc
gacccgtcgacgacgctcctctgcggcgacatgaacatcgcgcccgccgacgcggatctg
ttcgatcccgacgccttcgccgggcacacgcacgtcacccctccggaacgtgccgcgctc
gccgagttcgcggcgctgggtctgcgcgacgtggtccgtgaccgctggccggatgaccgg
gtcttcagctactgggactaccgtgccggaatgttccacaaggacctgggcatgcggatc
gatctcatcctggcgggtgagtcggccgccggccgggtcgaggcggcctggatcgaccgc
aaggcgcgcaagggcagcaagcccagtgatcacgcgccggtcatcgtcgacctcgacgag
gcgcccgacggcgacatcggtccggtggtcccgccgccgtcgaatccggcgaaacccggt
ggcgcgaaggtgaaactgccccagaccccggagtga
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