Gordonia sp. 135: GKZ92_20445
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Entry
GKZ92_20445 CDS
T06305
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
god
Gordonia sp. 135
Brite
KEGG Orthology (KO) [BR:
god00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
god03000
]
GKZ92_20445
Transcription factors [BR:
god03000
]
Prokaryotic type
Helix-turn-helix
Other families
GKZ92_20445
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_8
AAA_lid_14
Sigma54_activ_2
HTH_30
HTH_7
HVO_A0261_N
Sigma54_activat
HTH_29
HTH_23
HTH_1
UBA_HOIP
Aldolase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QGP89793
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Position
4512791..4514557
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AA seq
588 aa
AA seq
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MRDVFLATGSADPHDVEAAGISSQLLDSWRRSLRYGLDASAPRPVQSDGRESNLSFIDTV
DQVLTKRESALEQAMCGLSLTDADGMILRQWVRDPALSTWLEKQSIVPSINVDETSIGTS
SGICLLNGRPSMVRGLEHFADDYASVTSAGVPVIHPVTRRVIGSLNLTSRYEDTSPVLLS
WVMELVHEIQSAFQELASRRERMLLDAYLNENRDARHPLVALNDQTIITNATAARMLTSV
DQALLWEHASRAIRDQISTSRSLVLTDGTVVSVQCHEVTNAAESAGAVLRIRPVVDRNAR
SGSSVRPAPGLPGLVGEGPRWRDLCRQAAAVAGSGTVLVVGERGSGKVAVATAMAGHSGP
VTVIDAADAAFDGAQAWLQQLDSSLRGSGGAVILRRCDELAEPTALAVANLLRTHRDGSV
RVFATATRAEDDRRPALLGSEFASVLTVPALRDRLEDLPALLDALTRRCAVRLGRDDKPV
RWMADAVQALSRLEWRGNVSSLETVVLRVLQNNRNGYINASDLPADVVANASRRKLVGLE
QVEAGAIIAALRDAGGNKNRAAEDLGIARSTLYRKIRSLGIDLSTSAF
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgagagacgtctttctcgccactggttccgccgatcctcatgatgtcgaagccgcgggc
atctcctcgcagctgctcgactcttggcgccggtcgctgcgttacggactcgacgcatca
gcgccgcggcccgtgcagtcggatggtcgcgaatccaatctgtcgttcatcgacacggtt
gatcaggtgcttaccaagcgtgagtccgcactcgaacaggcgatgtgcggactgagtttg
accgacgccgacggaatgatcctgcggcagtgggtccgggaccctgctctgtccacttgg
cttgagaagcagagcatcgtcccctcgatcaatgttgacgagacctcgattgggaccagt
agcggaatatgtctgctgaacggacgccccagcatggttcgtgggctcgagcacttcgcc
gacgattacgcctcggtcacctcggccggtgtcccggtgatccacccggtcacacggagg
gtaatcgggtcgttgaacttgacctcccgctatgaggacaccagtccagtgctgctgtcg
tgggttatggagctggtccatgagatccagagtgcttttcaggagttggcatctcggcgc
gagcgcatgctgctcgatgcgtatctgaacgagaaccgggatgcacgtcatccgctcgtc
gctctcaacgaccaaacgatcatcactaacgcaaccgcagcgaggatgctcacgtcggtg
gaccaggcactgttgtgggagcacgcgtctcgcgccattcgcgatcagatctcgacttct
cggtcactggtgctcaccgatggcaccgtcgtgtcggtgcaatgtcacgaggtcacgaac
gcagctgagtcggcgggcgccgtcctcaggattcggccggttgtggaccgcaacgcccgc
agtgggtcctccgtgcgcccggcacccggattgccgggtttggtgggcgagggcccccgg
tggcgcgatctgtgccgtcaggctgcggctgtcgccggtagcggaacggtactcgtagta
ggtgagcgcggtagcgggaaagtcgccgtggccaccgcgatggctggacattccggtccc
gtgaccgtcatcgacgcggctgacgccgcattcgatggtgcacaagcgtggttacaacaa
ctcgactcgagtcttcggggatcaggcggcgcggtgattctacgacggtgtgatgaactc
gcggagccgactgcactggcggtcgcgaacctcttgcgcacccaccgggacggctcggtt
cgagtctttgccaccgcgacacgggctgaggatgaccggcgtccagccctgctcggttct
gagttcgcctcggtactcactgtgcccgctctgcgggatcgcctcgaggacctcccggcc
ttgctcgatgcgctgacacgtcgctgcgcggtgcgattgggcagggacgacaagcccgtg
cgatggatggccgacgcggttcaagccctgtcgaggttggagtggcgaggcaacgtttcc
tcactcgagaccgtcgtcctgcgagtgctgcagaacaaccgcaacggatacatcaacgcc
agcgatcttccggccgacgtcgtcgctaacgcttcgcgtcgaaagctcgtcggactcgag
caggtcgaggccggtgcgatcatcgctgcactccgggacgccggcggtaacaagaatcgg
gccgcagaggacctcggcatcgcccggtccacgctgtatcgaaagatccgctcgctcggc
atcgacctgtccacgtccgcattctga
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