Galendromus occidentalis (western predatory mite): 100897475
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Entry
100897475 CDS
T11057
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
goe Galendromus occidentalis (western predatory mite)
Pathway
goe03020
RNA polymerase
goe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
goe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100897475
09124 Replication and repair
03420 Nucleotide excision repair
100897475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
goe03021
]
100897475
03400 DNA repair and recombination proteins [BR:
goe03400
]
100897475
Enzymes [BR:
goe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100897475
Transcription machinery [BR:
goe03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100897475
DNA repair and recombination proteins [BR:
goe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100897475
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
100897475
NCBI-ProteinID:
XP_003740810
UniProt:
A0AAJ6QQR8
LinkDB
All DBs
Position
Unknown
AA seq
1851 aa
AA seq
DB search
MSQIITSDSKAILREVREVQFGILDPDEIRRMSVTEGGIRYAEIYEGNRPKLGGLMDPRQ
GVIDRTSRCLTCSGNMTECPGHFGHLELAKPVFHVGFLTKTLKVLRCVCYYCSRLLVSPN
HPRMREILSKTKTTQRQQRLDKVYEICKTKSMCEESDTSDKGQGEPTEEERKMMHVGCGR
YQPNYRRSGLDISAEWKHTNEENQEKKQVLTAERVYEIFKHISEEECFCLGMDERYAKPS
WMVLTVLAVPPLCVRPAVVMFGSARNQDDLTHKLSDIVKANNELIRNEQSGAAPHILAEN
VKMLQFHVATLYDNELPGLPRAMQKSGRPLKSIKQRLKAKEGRIRGNLMGKRVDFSARTV
ITPDPNLKINEVGVPRSIAQNLTFPEIVTPFNIERMQELVSRGNNQYPGAKYIVRENGER
IDLRFHPKASDLHLQCGYRVERHVQNGDIIVFNRQPTLHKMSMMGHKIRVLPWSTFRMNL
SVTTPYNADFDGDEMNMHVPQSLETRAEIEQLAMVPRQIITPQANKPVMGIVQDTLTAVR
KMTKRDVYLEKDQMMNLLMFLPIWNGKVPIPAILKPKPLWTAKQLFSLIIPGNVNLIRTH
STHPDEEDDGPYKWISPGDTKVIIEHGQLLSGIVCKKTVGASAGSLMHVLFVEMGHEVAG
AFYSHLQTVVNAWLLYEGHSIGIGDTIADQQTYMDIQNTIKKAKQDVIEVIEKAHNDELE
PTPGNTLRQTFENQVNRILNDARDKTGGSAQKSLSEFNNFKSMVVSGAKGSKINISQVIA
CVGQQNVEGKRIPFGFRKRTLPHFIKDDFGPESRGFVENSYLAGLTPSEFFFHAMGGREG
LIDTAVKTAETGYIQRRLIKAMESVMICYDGTVRNSNGQVIQFRYGEDGLDGCCVETQYL
ATIKPSDRQFEQKFRFDVANEKLLRKVYTEDVVKELNSSASAVAEMEREWDCLKKDREIL
RNVFPTGTSSVVLPCNLSRMVWNAQKTFRVNSRGKTDLSPLRVIEGVESLVKKLIIVPGD
DHLSIQANENATLLFRALLRSTLCSRRVGQEFRLSTEAFDWLLGEIEARFHQSQGQPGEM
VGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINISKQPKTPSLTVFLKGA
SARDAEKAKDVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQDFVNVYYEMPDFDPTK
ISPWLLRVELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNADKLVLRIRIMNNDG
DKFADGAEEQADKMEDDVFLRCIESNMLSDMTLQGIEAISKVYMHLPTTDDKKRIVVTET
GEFKAISEWLLETDGTSLMRVLSERDVDPVRTYSNDIIEVFSVLGIEAVRKAVEKEMNHV
ISFDGSYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDILMDAAFH
AEADKLKGVSENIILGKLARMGTGAFDLMLDAEKCRLGIEVSMAMPGMEGMPGQGVFFGS
AATPMAGMSPQMTPWNAGQTPAYGMWSPTSNMTPGAAGFSPSAQSEVGFSPAYSPAYSPA
QSPGSPSSPAYYSPLHVGGTSPLHVGGTSPSYSPQITSPSYSPSSPSYNLASPSYSPTSP
QYSSGSSPTTPSYSPSSPSYSPSSPTYSPSSPSYSPSSPQYGASSPSYSPTSPSYSPSSP
SYSPSSPSYSPSSPSYSPTSPSYSPSSPTYSPTSPSYSPSSPKYSPASPTYSPASPKYSP
SNASYSPSSPSYSPSTSHHFSPSPSYSPSSPTYSPSSPNISTSPSYSPSSPKYSPSSPTY
SPSAASYSPSSPTYSPSSPTHQGAHYSPSSPTYTPSSPAYSPSQGEDTDQD
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaattataacgtcggactcgaaagcgatcctccgtgaggtgcgggaggtgcaa
ttcggaattctcgatcccgacgagatccgtcgcatgtcagtgacagagggcgggatccgg
tatgcagaaatatacgagggcaacagaccaaagcttgggggtctcatggaccctcggcaa
ggagtcatcgatcggacttctcgttgcttgacctgctcggggaacatgacagaatgtccc
ggacatttcggtcatctagaactcgcgaagccagttttccacgtcggcttcctgaccaag
accctcaaagttctcagatgtgtctgctattactgcagtcgtctactcgtcagtccgaac
catcctcgcatgcgcgaaatcctctccaagaccaagacgacacagaggcagcagcgtttg
gacaaggtttacgaaatttgcaagaccaagagcatgtgcgaagagagcgacacgagcgac
aagggtcagggcgagccgacggaagaggaaagaaaaatgatgcacgtcggttgcgggaga
tatcagcccaactatcgtcgttccggtctcgacatcagcgcagagtggaaacataccaat
gaagaaaaccaggagaagaaacaagttctgaccgcggagcgagtatatgaaatattcaaa
cacatctccgaggaagagtgtttctgtctcggcatggacgagcgctacgccaaacccagc
tggatggtcctgacggtcctggcagtgccgcctttgtgcgttcggccggccgtcgtcatg
ttcggctcagccagaaaccaggacgatctcacccacaagctttccgacatcgtgaaagcc
aataacgaacttatcaggaacgagcagagcggggcagcgccccacatattggccgaaaac
gtcaaaatgctccaattccacgtcgccaccctctacgacaacgagttgccgggccttccg
cgggcaatgcaaaaatcagggagacccctcaaatcgataaagcaacgtctgaaagccaag
gagggccgtatcagaggcaatctcatggggaaacgagtcgatttctcagcgcgaaccgtc
attacgccggacccaaacctgaaaatcaacgaggtcggtgtgccgaggagcatcgctcaa
aatttgacgtttcccgaaatcgtcaccccgttcaatatcgaacgcatgcaggaacttgtg
tcgcggggaaacaatcagtatcccggcgcgaaatacatcgttcgcgagaatggcgagcgg
atcgatctcaggttccatccaaaagcttcagatttgcatctgcagtgcggatacagagtc
gagcgtcatgtgcagaatggcgacataattgttttcaaccgtcagccgacattgcacaaa
atgagtatgatgggccacaagatccgtgtgctcccttggtcaactttccggatgaactta
tccgtgacaacaccgtacaacgccgatttcgacggtgacgagatgaacatgcacgttcct
caatccctggaaacccgtgccgaaatcgaacaactggccatggtgcctcgccagatcatc
actccgcaagccaacaagcccgttatgggcatcgtacaggacacgctcacggccgttcga
aaaatgacgaaacgtgacgtatacctggagaaggaccagatgatgaatctgttaatgttc
ctcccgatctggaatgggaaagtaccgattcccgctattctcaagccgaaacccctgtgg
acagcgaaacagctgttctcactcatcatacccgggaacgtcaatcttatccggacccat
tcaacgcatccggacgaagaggatgatggaccctacaagtggatatcccctggggatacg
aaggtcatcatcgagcacggtcagctgttgtccggtatcgtttgtaaaaagacggtcgga
gcttcggcaggctcgctcatgcacgtcctcttcgtagaaatggggcacgaagtggcgggt
gctttctattcccatctccaaacggttgtgaacgcgtggctgctatacgaaggtcactcg
atcggtatcggggacaccatcgccgaccaacagacctacatggacattcagaacactatc
aaaaaagcaaaacaagacgtcatagaggtcatcgagaaagcccacaacgacgaactcgag
ccgacgcccggaaacacgctgcgacagacattcgagaatcaggtgaatcgaatcctgaac
gacgctcgagacaaaacaggaggttccgcccaaaaatccctctccgaattcaacaacttc
aagtccatggtagtgtcgggcgcaaagggatccaagatcaacatctcccaagtaatcgct
tgtgtggggcagcagaacgtcgaaggaaaacgcatacccttcgggttccgtaagagaact
ctgccccatttcatcaaagatgatttcggaccggaatccaggggcttcgtagagaactcc
tacctcgccggcctcactccctccgaattcttcttccacgctatgggaggacgtgaaggt
ctaatcgatacagctgtgaaaaccgctgaaaccggttatattcaacgtcgtctgatcaaa
gccatggagtcggtgatgatctgctacgacggtacagttcggaactcgaacggtcaagtc
atccagttccgctacggagaggacggcctcgacggatgttgcgtggagacgcaatatctc
gctacaattaaaccttcagaccgacaattcgagcaaaagttccgattcgatgtcgccaac
gagaagcttctacggaaggtttacaccgaagacgtggtcaaagagctcaacagctcagcg
tcggccgtggccgaaatggagcgcgagtgggactgcttgaagaaagatcgtgaaatactc
aggaacgtcttcccaaccggaaccagcagcgtcgtcctaccatgcaacttgagccgtatg
gtctggaatgctcagaaaacgttccgggtgaactccagagggaaaaccgacctcagtcct
ctgcgagtcatcgaaggtgttgagagcctcgtgaaaaagttgatcattgtgcccggcgac
gatcatctctcgattcaggcgaacgagaacgccacattgttgttcagagctctgctgcga
tcgactctctgctcccggagagtgggtcaggagttccgcttgtccacggaagcgttcgac
tggctgctcggtgaaatcgaggccagattccatcagtcccagggtcaaccgggagaaatg
gtcggcgccctcgccgcccagtctctaggagaacctgccacgcagatgacgctgaacact
ttccattacgccggagtgtcagctaagaacgtgacgctcggtgtacctcgtctaaaggaa
atcatcaatatctcaaagcagcccaaaacgccgtcgctgaccgtgttcttgaagggcgca
tcggctcgagacgccgagaaagccaaagacgtcctgtgtcgactcgagcacacgacgctc
cggaaagtcacagccaacaccgccatctactatgacccggacccccagaacacagtaatc
gccgaggatcaggacttcgtcaacgtctactacgaaatgcctgacttcgatccgacgaag
atctctccgtggctcttgcgtgtcgaattggatcgcaagcgaatgacggacaagaaactc
accatggaacagatcgctgaaaaaatcaacgccggattcggtgacgatctcaactgcatc
ttcaacgacgacaacgccgacaaactcgtgctccgcataaggatcatgaacaacgacggc
gacaaattcgccgacggcgccgaagaacaagccgataaaatggaagacgatgttttcctc
cggtgtatcgagagcaacatgctctcggacatgacgttgcagggcatcgaagcgatctcc
aaagtgtacatgcatttacctaccacggacgacaaaaaacgaatcgtcgtcaccgaaacc
ggggaattcaaagcaatttccgagtggcttctcgaaactgacggtacctcgctgatgcgg
gtcctatccgagagggacgtcgatccggtgaggacgtactcgaacgacatcatcgaggtg
ttctccgtgctcggcatcgaagccgtccgaaaagctgtcgaaaaagaaatgaatcacgtc
atctcgttcgacggttcctacgttaactacaggcatctggctctcctttgcgacgtcatg
accgccaaaggtcacttgatggccatcacacgtcacggtatcaatcgacaagacacgggc
gctctaatgaggtgctcgtttgaggagactgtcgatattctaatggacgcggcattccac
gcagaggccgataagctgaaaggtgtctcagagaacatcattctgggtaaactcgctcgc
atgggaaccggagcgttcgatttgatgctcgacgcggaaaaatgcagacttggcatagaa
gtcagcatggctatgcccgggatggagggcatgcctgggcaaggggttttcttcggctct
gccgcgaccccgatggcgggtatgagcccccagatgaccccgtggaacgcgggtcaaaca
cctgcctacggcatgtggtcccctacgtcgaacatgaccccgggagccgcgggattctcc
ccgtctgcccagagcgaggtcggcttctctcccgcgtattctccggcgtattcgccagcg
cagagcccgggctcgccgagcagtcccgcctactattcgccgttgcatgtaggcggaact
tcgccgctgcatgtcggcggaacttcgccgtcttacagtccgcaaataacgtccccgtcg
tactcgccgtcgtcgccttcgtacaatttggcgtcgccgtcctacagtccgaccagtcct
cagtacagcagtgggtcatcgccgaccaccccgagctacagtccttcgagtccgtcgtac
tcgccatcatcgcccacgtattccccgtcgtcaccgtcgtacagcccatcgtcgccgcag
tacggagcctctagtccttcgtattcgccgacctcgccgtcgtactcaccgtcgagtcct
tcctactccccgtcgagtccctcgtactcgccgtcgtctccgtcttattccccgacgtcg
ccgtcgtactcccccagttcgccgacctattcgccgacgtcgccttcttattccccatct
tctcccaagtacagtccggcgtcgcccacttattcccccgcgtcgccgaagtattctcca
tcgaacgcgtcctactcgccctcatcgccttcatattcgccgtcgacgtcgcatcatttc
tccccgtcgccatcgtacagtccgtcctcaccaacgtattcaccgtcttctccgaacatc
tcaacctcaccttcatacagtccttcgtccccgaagtactctccatcgtctccaacgtat
tccccgtcggcggcttcttactccccgtcttcgccaacgtactccccgagctctcctacg
catcagggtgcgcactattctcccagttcgccaacttatacgccgtcctcgccggcatat
tctccgtcgcagggcgaagacacagatcaagattga
DBGET
integrated database retrieval system
