Galendromus occidentalis (western predatory mite): 100897676
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Entry
100897676 CDS
T11057
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
goe Galendromus occidentalis (western predatory mite)
Pathway
goe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
goe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100897676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goe03019
]
100897676
Enzymes [BR:
goe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
100897676
Messenger RNA biogenesis [BR:
goe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
100897676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
nSTAND3
MMR_HSR1
TniB
AAA_22
AAA_16
AAA_18
CbiA
AAA_35
AAA_24
ATP_bind_1
RsgA_GTPase
ABC_tran
SRP54
GTP_EFTU
AAA_10
Motif
Other DBs
NCBI-GeneID:
100897676
NCBI-ProteinID:
XP_003740435
UniProt:
A0AAJ6QQC6
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MAEAESKQDFKLEKENELRFEVEAPHTVRLELVEGFAEIFGVEIVKDKEYVFTSGSKIAV
FTWHGCTLRLFGTTEVVYVSKETPMVIYANIHAVLEQMRQKAEQKGTKGPTVMVVGPTDV
GKSTLCKILLNYAVRQGRRPVFADLDVGQGQISLPGTIGAVLVERPSDVEEGFSQQGPLV
FHFGHISPGENIELYNMLTQKLAQVLQSRANVNKRASHSGVIINTCGWVKQSGYRALLNA
VLNFEADVVLVMDQERLYNEMVRDLPAFVNVVFTPKSGGVVERVKKNRVDAREAAVKQYF
YGLKTALYPHSFDVKFNEVKIYKIGAPALPDSCMPLGVKVENNKTKLVEIHSPASLLHHI
LAVSFASPGDQDEDIILSNVAGFLCVTNVDTERNTITVLSPQPRPLPKSVLLLSEVQFVD
SAH
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcggagtcgaagcaggatttcaaattggagaaggagaatgaactccgcttc
gaggtcgaagctccccacacagtccgactcgagctggtggagggattcgcggaaatattc
ggtgtcgagattgtcaaagacaaagaatacgttttcacaagcggctcaaagatcgctgtt
ttcacatggcatggatgtaccttgcgcttgttcggcaccacggaagttgtttacgtttcc
aaagaaactccaatggtcatatatgccaatatccacgctgtcctggaacaaatgcgtcag
aaagcggagcagaagggaaccaaaggtcctacggtgatggtggtcggtccgaccgacgtt
gggaagtccactctctgcaaaattctactgaactacgccgtgcggcagggacgtcgaccg
gtgttcgcagacctggacgtaggtcagggtcagatctccctccccggcactataggcgcg
gtattggtcgagagaccgtccgatgtcgaggagggcttcagtcagcaaggaccactggtt
ttccatttcggtcacatcagtccgggggaaaacattgaactgtataatatgttgacgcag
aagcttgcgcaagttttgcaaagtagagcaaacgtcaacaaacgagcgtcccacagcgga
gtgataatcaacacctgcggatgggtgaagcaatccggctacagggctctgctcaacgcg
gttttgaattttgaagcggacgtcgtcctcgtcatggaccaggagagattgtacaacgaa
atggtccgagatctgcccgctttcgtgaacgtagttttcacgccaaaatctggcggcgtc
gtggaacgagtcaagaagaatcgcgtcgacgcccgtgaagccgctgtgaaacagtatttc
tatggactgaaaacggcactgtatcctcactcattcgacgtcaagttcaacgaggtcaaa
atctacaaaataggtgcccccgccctaccggactcgtgcatgccgttgggcgtgaaggtt
gagaacaacaaaacgaaactcgtggagattcacagtcccgcctcgcttctacaccacatc
ctcgcggtatccttcgcatcgccgggcgaccaagatgaagacatcatcctcagcaacgtg
gcaggattcctctgcgtcaccaacgttgatacagagcgcaacaccatcacggttctgtca
ccgcaaccacgacctctcccgaagtcagtgttgctcctgagtgaagttcagttcgttgac
tccgcacactag
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