KEGG   Galendromus occidentalis (western predatory mite): 100897947
Entry
100897947         CDS       T11057                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
goe  Galendromus occidentalis (western predatory mite)
Pathway
goe03013  Nucleocytoplasmic transport
goe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:goe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100897947
  09122 Translation
   03013 Nucleocytoplasmic transport
    100897947
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:goe03019]
    100897947
   03041 Spliceosome [BR:goe03041]
    100897947
Messenger RNA biogenesis [BR:goe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100897947
Spliceosome [BR:goe03041]
 Complex C
  Other components
   EJC/TREX
    100897947
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100897947
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_Aladin Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N eIF2A Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_1st Beta-prop_EML NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_1st WD40_RFWD3 Tricorn_2nd DSE1_N B-prop_COPA_B_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st RMC1_N Beta-prop_EIPR1 Beta-prop_SPT8 ASA1 Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 PAC11 Beta-prop_ACSF4 WD_LRWD1 TRM82_WD WDCP HSF_DNA-bind
Other DBs
NCBI-GeneID: 100897947
NCBI-ProteinID: XP_003748466
UniProt: A0AAJ6QYT0
LinkDB
Position
Unknown
AA seq 326 aa
MTFGASTPDVISLRKYFAQNDRVKEFGVHSLKVHCVSWNQDGRKLASGSLDKTVTIFTLD
KDRLSKDTTLRGHSDSVDQLCWHPKQVEVLATASVDKTVKMWDARQPKATHSVATKGENI
NICWSPDGQTIAIGNKEDLVSFIDVASFKIRKEQQFKFEVNEMSWDKTGQFFFLTSGLGC
IHIYSYPDMALVQVLQAHPSNCICVQFDPTGKYFATGSSDALVSLWDVNELICLRTFNRL
DWPVRTLSFSHDGKLIASASEDLIVDIAHVETGDLIYQIPVKASTFSVAWHPKRYLLAFA
CDDKYGTGEDRERDAGLVKLFGVSRD
NT seq 981 nt   +upstreamnt  +downstreamnt
atgactttcggggcttccactccggacgtgatatctttgcggaagtatttcgctcagaac
gatcgcgtcaaagagttcggcgttcatagtctgaaggtacactgtgtatcatggaatcag
gacggtcgaaaactggcgtcaggcagcctcgataagacggtgacaatcttcaccctcgac
aaagaccgcctcagtaaagacacaacccttcgcggtcattcggactctgtggatcagctg
tgttggcatccaaaacaagttgaggttctagccacagcgtcggtggacaaaaccgtcaaa
atgtgggacgcccgtcaaccgaaagccactcacagcgttgcaactaagggggagaacata
aatatatgctggtcaccagacgggcagacgattgccattgggaacaaagaagatcttgtg
agcttcatcgatgtagcatccttcaagatccgcaaggaacaacaattcaagttcgaggtg
aacgaaatgtcgtgggataaaacagggcaattctttttcctcacgagtggcctcggttgc
atacacatatacagttacccagatatggcgttggtccaagtattgcaagctcacccttcg
aattgcatatgcgttcaattcgatcccacggggaaatatttcgcgactgggagctccgac
gcgctcgtctcattgtgggacgtcaatgaactcatctgtctgcggactttcaacaggctt
gactggcccgtcagaaccttgagcttcagtcacgacggcaagctaatagcatctgcctct
gaggatctcattgtggatatcgctcacgttgagacaggtgatctcatctaccaaattccg
gtcaaggcatccaccttctcagtagcctggcatccgaagaggtacttactggctttcgcc
tgcgatgacaaatacggaactggggaagaccgtgaacgagatgcgggtctcgtgaaactt
ttcggagtcagtcgcgactga

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