KEGG   Galendromus occidentalis (western predatory mite): 100898477
Entry
100898477         CDS       T11057                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
goe  Galendromus occidentalis (western predatory mite)
Pathway
goe03013  Nucleocytoplasmic transport
goe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:goe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100898477
  09122 Translation
   03013 Nucleocytoplasmic transport
    100898477
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:goe03019]
    100898477
   03041 Spliceosome [BR:goe03041]
    100898477
Messenger RNA biogenesis [BR:goe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100898477
Spliceosome [BR:goe03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100898477
SSDB
Motif
Pfam: Beta-prop_IFT122_1st WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_NOL10_N Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd EIF3I WD40_Gbeta Beta-prop_EML Beta-prop_TEP1_2nd DSE1_N Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_NUP159_NUP214 Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st WDR54 ASA1 Beta-prop_DCAF4 Beta-prop_RIG_2nd TRM82_WD DUF8146
Other DBs
NCBI-GeneID: 100898477
NCBI-ProteinID: XP_003746340
UniProt: A0AAJ6VZX6
LinkDB
Position
Unknown
AA seq 325 aa
MQTSLIDYYMKVLCQCYSEDGRLLVCGNNYGELLLFDIDKVLKDEDLQEEALKSSTRQQV
STGAIYCLTSVGDFLLAGGVGEVLAFHWSAIREGKLEVDWAVRLPIHGGLNKPEVNAIAL
SDSERKMHLAAGDNKIYVYELETRHFLGALEEHQDYVHDLAINRHGTELYSAGEDGAVKL
WDLRSKKTVCSVDIKKHDRLRSASGATWVGAVSLDESEEWLVVAGGHRPTVLHTKSMTPA
IVFAEVEQDCFVAKFCNDMITLAGEGGKVYHFTMAGELRAAVPSSSTAIYAVALHPAKKC
CTTSGASNRLDLSRNLLYNDLVLTV
NT seq 978 nt   +upstreamnt  +downstreamnt
atgcagacctccctcatagactattacatgaaggtactctgccagtgttattccgaagac
ggtcgcctactagtgtgtgggaacaattacggcgaactgctgctgttcgatatcgacaag
gtcctgaaggatgaagatcttcaggaagaagccctaaaatcatccaccagacaacaggtc
tccaccggagccatatattgtttgacttctgtaggagacttcctcctggcgggaggggtc
ggcgaagttcttgctttccactggagcgctatccgagaagggaagctcgaagttgactgg
gcggtgcgcctccccattcacggagggctcaataagccggaagtgaacgcgatcgcgctc
agcgactccgaacgcaagatgcacttggctgccggcgacaacaagatctacgtgtacgag
ctcgaaactcggcatttcctgggagctctcgaagagcatcaggattacgtgcacgacctc
gccataaacaggcacggtaccgagctgtactcggccggcgaagatggcgccgtgaaactt
tgggatctgaggtcgaagaagactgtctgttcggtggacatcaagaaacacgacagattg
agatcggccagcggagcgacttgggtcggtgccgtttccctcgacgaatcagaggaatgg
ctcgtggtcgctggaggacacagaccaaccgtattgcacacgaaatcgatgaccccagcc
attgtcttcgctgaagtcgagcaggactgtttcgtggccaaattctgtaacgatatgatc
actctggcgggagagggaggcaaggtgtatcacttcacaatggccggtgagctcagagcg
gcggtcccatcatcgtctacggctatctacgcggtcgctctacatcccgcgaagaaatgt
tgcaccacttccggagcgagtaatcgactcgatcttagcaggaatctactttacaacgat
cttgtactcacagtatga

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