Galendromus occidentalis (western predatory mite): 100899673
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Entry
100899673 CDS
T11057
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
goe Galendromus occidentalis (western predatory mite)
Pathway
goe03015
mRNA surveillance pathway
Brite
Transcription machinery [BR:
goe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100899673
Messenger RNA biogenesis [BR:
goe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100899673
U7-dependent histone pre-mRNA processing factors
100899673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
100899673
NCBI-ProteinID:
XP_028968419
UniProt:
A0AAJ7SGV9
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MPNVVPTAAQFFAEESDVGPEDISQRVVALLDEAAVATREQHKILNLRTVQELITNRDAA
LLDNFLDEVLAFQNDRSPDVKKFLIGFMEIACKRDPAILPKVVANIRIMLDEENPNVQKR
AIQAATQLYRVCFKWLCASKGTSDIDDLKKSTWKYFQDIKESIVGLLDSYNDGIRTLVVK
FMEMVVLTQTFPDAHSPTRGEDEVSLDDASTHVAQFIKPSQLEEQAKKTLERLLAFHGTQ
HISSVNLMACSQSLVIIAKSRAEFMSRVINALEALHANLPPTLSKSQVSSVRKHLKLQLF
LLCKHPVALGFAPQLTTLLSDLGATPHEMAKQLPPKFIEESSRKRSIPVDAPVARKIPRS
SPSVVSAVADEEEDDETSKVPKMAQDPTQSAIDITASDIAPRLTTLNVTDVVLVTMLRLP
ETMPANFQATYTPISVAGTEQQIAHLSRLMATQMTAQNMGKGVEEMMKKAQLEMSRAEAE
PMQIETIGRAKAASSSTSASHSSSSQKSKSDESSPILLPAGAEALKMRARTLNLSEVTKS
MNRKEGEQFMSSAVRRLLRTGSIGHSKAKLKTIARLAMQIRGQISEVIREFIFQNVRANS
DLVMVWLFEEYNADLSSEGIDSSLRNYGQCLQDILMDLLIKVETRDRDVIFQKIFMEAPV
VTENAIDILQQYCQNEVSVNHGLNILRSLIEYRPIKQKHYLELLLQLTVNHMEEVRQQAV
KQCLILAEKSAEMKEAVERYAVDHLRSLLQPSPPASLYPNQQDGDNVWLEDDIKLCMTLY
LALLPANHSLVHELAKVYVDAPPDTKRTILWTLEQPVKGMGMESPELLRLLENCPPGAET
LITRIIHLLTEQNTPSPELVARVRDLYHKRVADVRFLIPVLTGLTKKEVIAALPKLIKLN
SNVVKEVFNRLLGCGENGPLSPADLLVALHNIDPTKCDVKTVIKTTSICFAEKSVYTQDV
LALVLQQLMEQTPLPTLLMRTVIQSLALYPRLLGFVMNILQRLITKQVWKQKKVWEGFIK
CCERAQPQSLNVIIQLPPEPLRELFEAAPSLKDPLVQHVTSLTQHQKSHVPSKVLEILFP
EDVASKSKTPEKTETDEHHISG
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatgtagtcccaacagcggcgcagttctttgccgaggagagtgatgtaggacca
gaggacatcagccagagggttgtcgcacttctggatgaggctgccgtagccacgagggag
caacataaaatcttgaacctgcgcaccgtgcaagaattgattacgaacagagatgctgct
ctcctcgacaactttctcgacgaagtcctggctttccagaacgatcgcagcccggatgtc
aagaagttcctcattggcttcatggagatcgcgtgcaagcgagatccagccattctaccg
aaggttgtcgcgaacatcagaatcatgctggatgaggagaatccaaatgtgcaaaaacgc
gcgatacaggctgcaactcagctatacagagtttgcttcaagtggctgtgcgcctctaaa
gggacatcggacattgatgatttgaagaagagtacgtggaaatactttcaagacatcaaa
gagtcaattgtcggacttcttgatagctacaacgacggaatccgaacgctcgtcgtcaaa
ttcatggaaatggtcgtcttgacccaaacgttccctgacgcgcattcgcccaccagagga
gaggatgaagtttctcttgacgatgcgtctacgcacgtagctcaattcatcaagcctagc
cagctcgaggaacaggccaagaagactcttgagagacttctcgcattccacggaacgcaa
cacatatcatcggtaaacttgatggcctgctcccagagcctggtaatcatcgccaaatca
cgagctgaattcatgtcgcgggtcatcaatgctctggaagcgctccatgcgaatctaccg
ccgacgctctccaaatctcaagtctcatctgtccgcaaacatctcaaactacaactcttc
ctgctgtgcaaacatcctgttgcgctcggattcgccccgcaattgacgacactattgtcg
gatctgggcgcgaccccgcatgaaatggccaagcagctaccgcccaagttcatagaagag
tcatcccggaagcgttccatccccgtggacgctccggtggcaaggaagataccacgatca
tcgccttcggtggtttcggcggttgcagatgaggaggaggacgacgaaacctcaaaggtt
cctaagatggcgcaggaccctactcagagcgccatagacatcactgcttcagatattgca
ccccgtctcacaactctcaatgtcaccgacgtggtcctcgtcacgatgctacgactacct
gaaaccatgccagccaattttcaagcgacgtatacgcccatcagcgtggctggaacagag
cagcagattgctcatctctcgagactgatggcgacccagatgacggctcagaacatgggt
aaaggagtcgaagagatgatgaagaaggctcaactggagatgagcagagccgaggctgaa
cccatgcaaatcgagaccataggtcgcgcaaaagcggcgtcatcatcgacttcggcatcg
cattcgagctcatctcagaaatccaaaagcgacgagtcctccccaatcctattgccggct
ggtgcggaagctttgaaaatgagagcacggaccctgaatctcagtgaagtcacaaagagt
atgaataggaaagaaggagaacaattcatgtcgtcggcggtgaggagactactcagaact
ggtagcatcggccattcgaaagcaaaattgaagacaatcgctcgcctggctatgcagatc
cgagggcaaataagtgaagtcattcgggagtttattttccaaaacgtgcgggcgaattcg
gatctcgtcatggtatggctgttcgaagaatacaatgctgacctatcttcggagggcatc
gactcgagcttgaggaattacggccagtgtttacaagacattctgatggatctcctgatc
aaagtcgaaacgagagaccgtgatgtgattttccaaaaaatattcatggaagctcctgtc
gtgacggagaacgcgatcgacatcctgcaacagtattgccaaaatgaagtttctgtcaat
catgggttgaacattctacggtcattgattgagtatcgacctatcaaacaaaaacactac
ctcgaacttttgctccaattgacggtgaaccatatggaagaagtgcgccaacaagcggtc
aagcaatgtctgatactggctgagaaatcggcggagatgaaggaagctgttgagcgctac
gcggtcgatcatctgagatcgttgctgcagccttctccccctgcctccctgtatccgaat
caacaagacggcgataatgtctggcttgaagacgatatcaagctatgcatgacgttgtat
ttggctcttcttcccgcgaatcattcacttgtacatgaattggccaaagtttatgttgac
gctccaccggatacgaaacgaacgattctgtggactctggaacagcccgtcaagggaatg
ggcatggagagcccggagcttttgcggctcttggaaaactgtcccccgggtgcagaaacg
ctcatcacgcgaataatacatttgctgacagaacagaatacaccgtctccagaactcgtg
gcccgcgttcgtgatctataccataaacgagtcgctgacgtccgtttcctcataccagtc
ttgacaggactgacgaagaaggaagtcattgcggcgcttcccaaactcataaaattgaat
tcgaatgtcgtgaaagaagtcttcaatcggcttctgggctgcggggagaatggtccgcta
agccctgcggatcttctggttgctctgcacaatatcgacccgactaaatgcgatgtcaaa
accgtcataaaaacaacttctatttgcttcgctgaaaagtctgtctacactcaagacgtc
ctggcgctggtattgcaacagctcatggaacaaacaccgctaccgacactgctgatgcgg
acagtgatacagtctctggcactctatccacgactactaggattcgtcatgaacattctg
cagcgactcataactaaacaggtgtggaaacagaagaaggtttgggagggcttcataaag
tgctgtgagcgggctcagcctcagagcctcaacgtcattattcaacttccgccggaacct
ttgagggaattgtttgaagccgcgccgtcgctgaaggaccccttggtgcagcacgtgacc
tcccttacgcagcatcagaagtcgcatgtaccctcgaaagttctcgagatccttttcccc
gaagatgtggcctcgaagagcaaaacaccagagaaaaccgaaaccgatgagcatcatata
tctggttag
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integrated database retrieval system
