Galendromus occidentalis (western predatory mite): 100899759
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Entry
100899759 CDS
T11057
Name
(RefSeq) collagen alpha-1(I) chain
KO
K19719
collagen type II alpha
Organism
goe Galendromus occidentalis (western predatory mite)
Pathway
goe04512
ECM-receptor interaction
goe04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
goe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100899759
04518 Integrin signaling
100899759
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
goe00536
]
100899759
Glycosaminoglycan binding proteins [BR:
goe00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100899759
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
TILa
FnI_RECK
SPATA45
Motif
Other DBs
NCBI-GeneID:
100899759
NCBI-ProteinID:
XP_003745135
UniProt:
A0AAJ6VYD0
LinkDB
All DBs
Position
Unknown
AA seq
1518 aa
AA seq
DB search
MGFAIIMSPRTVGADSGGEQRQSAVIIPSSLWRLSGCHLLWLLAATAVLNSVFAAPQGAD
EDDYAEYDVDEAETVAPEAPLNTVEPEPGIEMCIWNGKTFTDLQEWQQDNCTTCRCLAGQ
VACNRVQCPSLAGCRGSTVLLANECCEVCVEEQETTVSEPIPGLPGPQGDHGSPGRPGER
GAPGEPGHHGVPGLPGPPGTVPDLNKWFTEQRALSGASGEKGPVDFQYMQASVGPPGTRG
TTGPPGPPGPQGFQGTRGEPGEPGPPGPTGPPGERGPVGPTGKDGDTGEDGKPGAQGPPG
TQGPRGLPGMSGLPGPKGHRGYPGLDGPKGETGAPGEKGSLGPPGKPGPSGPVGPAGPRG
ERGREGPAGPTGIRGTDGQIGPPGPPGSAGRSGPPGFPGAPGMKGDAGSQGPKGSAGLQG
PRGESGIPGSTGEPGPTGPPGKDGAPGDKGSRGDSGAAGIPGFPGPRGPQGLAGSPGVPG
PKGVAGNPGDQGHKGDSGPKGEAGALGPRGFPGPQGVAGKRGKTGAQGPPGPIGPQGERG
TPGPRGLPGPDGLPGQKGEQGIAGSLGPMGPKGSTGDNGKPGLPGLQGLRGTPGLPGLPG
KDGVPGVRGLPGADGKTGEPGQQGLQGLPGPTGLPGMKGEQGEPGLDGKPGAQGPQGPRG
DTGKEGPMGMVGLPGKPGEPGLRGPPGLQGSRGFQGLPGIVGNPGAPGKDGGPGVQGPPG
APGATGSRGERGFQGETGKQGIQGPPGERGDPGPAGQDGARGVTGEKGAKGHQGPPGLVG
LPGRRGDIGPIGSKGERGDHGPPGPEGPMGRPGEPGIQGPVGPVGHIGEPGIKGESGPPG
PMGPTGAPGQVGDRGAIGPPGPVGFQGPLGPPGPSGPKGNTGAIGAKGEQGKSGPQGPPG
DIGPLGPIGLQGPKGPRGEPGLKGDIGLPGLPGRPGETGRAGEPGAIGAPGPMGPPGIKG
VTGEPGRVGPQGQQGNPGPIGQPGIKGDGGAEGPAGQSGPVGPPGPQGERGLPGLPGLQG
PKGPYGPRGPQGERGLEGKPGADGPAGPVGLQGVQGPPGPQGERGTPGNEGKQGPPGIAG
RVGDKGPQGSPGSQGPPGPPGLIGPLGPAGQRGATGERGERGEPGPAGVAGPHGPRGAPG
VPGIQGAKGDRGEVGDRGLKGHRGLAGLQGLPGPAGPAGERGAPGPAGSSGLTGPQGPRG
TPGRDGSPGPQGVQGASGPRGPAGENGKPGTPGAAGPVGPPGPPGEPFGYDPAALQAILG
RTNTKGPDPMLGDDAGLLFDEKTSVEDKKKIIFTYYKQLVEEYDRLRNPTGTKDSPAKTC
RDLSVSHPEFKSGMYWIDPNQGDSRDAIEVYCDMAIGASCITPSPNAVDKKAHYIGKAKH
VWYSEMPGGRQFTYKIDRVQLTFLQMLSGRAEQNITYHCKNSVAFFDAQKNHFKKAVKLL
SSNDLELKTSKDETSTVNKFAYEAVYDGCKDRKNTWDHTILTFKSDKPNRLPIVDIAPRD
IGSRSQEFGLQIGTACFV
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgcaatcatcatgtcccctcgcactgtcggcgccgattccggcggggagcag
cgtcagtcagctgtcatcattccctcaagtttgtggcgtctttctgggtgccacctccta
tggctcctggccgcaaccgcagtcctgaattctgtgttcgcggcgcctcagggagctgat
gaagacgactatgcagagtatgacgtcgacgaagccgaaacagttgcgcccgaggcgccc
ttgaacacggtagagccggagcccgggattgagatgtgtatttggaatggcaaaaccttc
acggatctgcaggagtggcaacaggataattgcaccacctgccgctgcttggcgggtcag
gtggcatgcaaccgagtgcagtgtccatccctcgcgggctgcagaggctcgacggttctt
ttggcgaacgaatgctgcgaagtgtgcgttgaagagcaagagacaacagtgtccgaaccg
attcccgggctcccggggccacaaggagatcacggcagtccgggtcgtcccggtgagaga
ggagccccgggagagcctggacatcacggtgttccgggactccccggtccacccggtact
gtccccgatctgaacaaatggttcaccgagcaacgagcactgtctggagcctccggggag
aagggaccagtggatttccagtacatgcaagcctcggtcggtcccccgggaactcgcgga
acgacgggacccccaggtcctcccggcccccagggtttccagggcacacgtggcgaacct
ggcgagccgggtccccctggacctacaggaccccctggtgaacgcggtccagtcggaccg
acaggcaaagatggcgatactggagaggacggaaaacctggtgcccaaggaccccccgga
acacaaggtcctcgaggactgcctgggatgtcaggacttccggggccgaaaggtcatcga
ggttatccaggtctcgatggaccgaagggggaaacaggggcccccggcgaaaaagggtcc
cttggaccacctggtaaaccaggacccagcggaccagtcggtccagcggggcctcgagga
gagcggggacgcgaaggaccagctgggcctaccggcataaggggaactgacggccagatt
ggtcctcccggaccgccaggatctgctggacgatcgggcccccctggattcccgggtgct
cccggaatgaaaggggatgcgggtagccaaggacccaagggcagtgctggattgcaaggc
cccaggggagaatctgggatacccggatccacgggagaacctggacccacgggacccccc
ggcaaagacggagcccccggagacaaaggaagtcggggagacagtggagcggctggaata
cccggctttccgggtccccgaggaccgcaggggctagccgggagccctggagtcccagga
ccgaagggggtcgcggggaatcctggcgaccagggacacaagggtgacagtggaccgaag
ggagaggcaggcgccctggggccccgcggtttcccaggtcctcagggagtcgctggaaaa
cggggaaaaactggagctcaaggacctccaggaccgattgggcctcaaggagaaaggggc
acaccgggaccacgtggtctcccgggtcccgatggcctgccgggacagaagggagagcaa
ggcatcgcaggatctctcgggccgatgggtcccaaaggctctacgggagacaacggcaaa
ccaggcttgcctggtctgcaaggcctcagagggacccccggccttccaggtctcccaggc
aaagacggcgtcccaggagtgaggggtcttccgggcgctgatggtaaaaccggagagccc
ggccaacagggcttgcaaggactcccaggcccgacaggactgcctggcatgaaaggagaa
cagggtgaacctggtctcgatggtaaaccgggagctcaaggtccgcaaggacctcgtgga
gacaccggaaaagaggggcctatgggtatggtgggtttaccaggcaagcctggtgagccc
ggtctccggggacctcccggactccaaggatctcgaggattccagggccttcccggtata
gttgggaacccaggagcaccaggaaaggacgggggtcccggcgtgcaaggacctccggga
gcacccggtgcgactggatcgcgaggcgagcggggattccaaggagaaacgggcaaacaa
ggtatccaagggccacctggagaacgtggggatcctggtcccgccggtcaagatggtgct
cgaggagtgaccggagagaaaggagcgaagggacatcaaggacctccaggtctcgtgggt
ctccccggacgtcgaggagacattggaccgattggctcgaaaggagaacgcggcgaccac
ggtccgccgggtcctgaaggtccaatggggagaccaggcgagcctggaatccagggaccc
gtgggacctgttggtcatattggagagccaggcataaaaggagagtccggaccgcccgga
ccgatgggcccgacaggcgctcctggccaagttggggatcgcggagccattggaccgccc
ggtcccgtgggcttccagggtcctctcggacctccaggaccatctggtccgaaaggcaac
accggcgctatcggagcgaagggagaacaaggaaaaagtggaccacaaggtccacctggg
gatattggaccgctcggacctatcggtctgcaaggaccgaaaggtccccgtggagaacca
ggtctgaaaggagacataggtctgcccgggcttccgggacgaccgggtgaaaccggtcgt
gccggggagccgggagcgatcggagctcctggacccatgggacctccgggaattaaggga
gtgacgggggaacccggcagagtcggtccacagggacagcagggcaaccctggacccatc
ggtcagcctggaatcaaaggggacggaggtgctgaaggtcctgccggtcaatccggacca
gtcggacctcccggacctcaaggggagcgtggcttacccggactgcccggcctccaggga
ccgaaaggaccgtacggaccgcgcggacctcaaggcgagcgtggactcgaaggcaaaccc
ggagctgatggtcctgcgggtccagtcggactccaaggagttcagggaccccccggacct
caaggagagagaggaactcctggcaatgagggcaagcaaggccctccaggaatcgccgga
cgcgttggagacaaaggaccccaaggttctccgggttctcaaggcccacccggacctcca
ggtctgataggaccgctgggtccggccggacagagaggtgcgaccggagagcgcggagaa
aggggagaaccaggaccggccggtgtcgctggtccgcacggtcctcggggcgccccaggc
gtacctggaattcaaggagccaaaggcgatcgaggagaagtcggcgatcgtggcttgaag
ggacacagaggtctcgctggactccagggactgccgggacctgctggcccagcgggagag
cgcggagcgcccggacctgctggttccagcggcttgacaggtccgcagggtccacgcggt
acaccaggcagagatgggtctcccgggccccagggagttcaaggagcgtccggtcctcgg
ggacccgcgggagaaaatggaaagcccggcactcctggagcggctggtcccgtcggacca
ccagggcctccaggtgaaccttttgggtacgatccggccgcactccaagcgatcctcggc
agaacaaacaccaaaggacccgatccgatgctcggtgatgatgccggtctgctgttcgac
gagaagacttcggttgaagacaagaagaagatcattttcacttactacaaacagctcgtc
gaggagtacgaccgtctgagaaatccgacggggaccaaggattcccccgccaaaacctgc
agggatctctctgtctcccatccagaattcaagagcggtatgtactggatcgatccaaat
cagggtgattcgcgggatgcgatcgaagtctattgcgacatggcgatcggagcttcgtgc
atcacaccatcgccgaacgccgtggataaaaaagcgcattatatcggcaaggccaagcat
gtttggtactccgaaatgccgggaggtcggcagttcacctacaaaatcgatcgcgttcaa
ttgaccttcctccaaatgctcagtggtcgagccgaacagaatatcacgtaccactgtaag
aactccgtcgccttctttgacgctcaaaagaaccacttcaagaaagcggtcaaactgcta
tccagcaatgatctcgagctgaagacctcgaaagatgaaacctccacggtcaacaagttc
gcctacgaggccgtgtacgatggctgcaaagatcgcaagaacacctgggatcacacgatt
ctaaccttcaagtctgacaaaccgaacagactgccgatcgtagacatcgctccgcgcgac
atcggaagcagatcacaggagtttggtctccaaatcggaacagcttgtttcgtttag
DBGET
integrated database retrieval system
