KEGG   Galendromus occidentalis (western predatory mite): 100899842
Entry
100899842         CDS       T11057                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
goe  Galendromus occidentalis (western predatory mite)
Pathway
goe03018  RNA degradation
goe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:goe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100899842
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100899842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:goe03019]
    100899842
   03041 Spliceosome [BR:goe03041]
    100899842
Messenger RNA biogenesis [BR:goe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100899842
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100899842
Spliceosome [BR:goe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    100899842
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 100899842
NCBI-ProteinID: XP_003744104
UniProt: A0AAJ6VYI7
LinkDB
Position
Unknown
AA seq 116 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSREGDKFWRIPECY
IRGNTIRFLRIPDEVIEMVKDDMHNGGGARGGRGRGNFRGRGGQRGRGGAPRGRGM
NT seq 351 nt   +upstreamnt  +downstreamnt
atgctccctctgtcgctcctgaaaaccgctcagaaccatcccatgctagtcgagctcaaa
aatggggaaacgtacaacggtcacttggtcagctgtgacaattggatgaacatcaacctc
agggaggtgatttgcacgtcaagggaaggagataaattttggcggataccggagtgttac
atcagaggcaacaccattcggttcctccggatacccgacgaggtgattgaaatggtcaag
gacgatatgcacaatgggggcggagcgcgaggtggacgcggacgcggaaatttccgcgga
agaggcggtcaacgaggacgcggaggagccccgagaggtcgagggatgtaa

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