Galendromus occidentalis (western predatory mite): 100900132
Help
Entry
100900132 CDS
T11057
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
goe Galendromus occidentalis (western predatory mite)
Brite
KEGG Orthology (KO) [BR:
goe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
goe03036
]
100900132
Chromosome and associated proteins [BR:
goe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100900132
microRNA pathway
RISC loading complex
100900132
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Dicer_platform
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
RM44_endonuclase
Dicer_PBD
dsrm
Motif
Other DBs
NCBI-GeneID:
100900132
NCBI-ProteinID:
XP_018495704
UniProt:
A0AAJ7PA44
LinkDB
All DBs
Position
Unknown
AA seq
1825 aa
AA seq
DB search
MPRNPKFPPSKKPAPAQIRARQNVLLENAQKKHFTPAEFQVELLAEAKRGGNKVIFISVL
DKPFFIVNFTKENGYWLRPPSASIDKLLVVCLSSTEMLSTFQWLDDYTDLTCVCLDPDAD
EDEGLEKRLSNSSVILTVPTAISTLSEFSLKFCTVLIDRCESYAETDIAGSANLLKLIAD
RKLRVVGLTNALSGVGSAETARSRIQNLEKYWKAQATVCNDLTVLSKYGPKPEEKVLEYG
IFYADKDVEYDMVLDLIENNLKFLEMSLKLKGNYSEVIQEAMRYPMELAYVFLTLGPWCA
AEAAQEFLGEVSRSIDNLEYLTDIQISKTTLQIVFTFLQQFLELCRILVDLVKCDPSEAN
AIHPDKLTNLMDAILLYTKPKMVPSQISEDGKKSKPHCVPWHEDPTALCGLIIVRHRITA
LVVNRWLETVSKTVPSLAFVKSNFIIGQTTLDGDDPELVAAGLTRQEEVLQKFRYRDYNL
LITTTATEDTLELPHCNLVVRFDPPESYKSYIVCKAKAKASSKCARFFIMLSQYETAKFT
HLFSDYRKMEGLLLERSHQEDVTTEGDEGASPSDLERCYRPSSGDCLVATLSNSIAIINR
YCLRLPSDTLTKLAPVFRINKLPDDTYQCVLRLPINSPLKEEIVGEPMATPVLAKQDVSL
RALERLHKRGEIDDHLSPFGKDSLKAKTEDQVVPLDETVAHGAARPGTTKRRQYYHKSLA
PPFQGTLDTETFFLYNISMKLLCAIPEEQNSRARTIYDPADSPRGFGFVSGTRLTPLCPF
PIYTRSGEVMVDVEELSCALPLTEEQRKKAEFFHAYVFRDVLRLEKFPMKFDLKASRAGF
LIIPITDGSVEWSFIDRIMNEDEFKPHKVDEEERRSFTFNREIFSDAVVMPWYRNIDKPQ
FFYVANICEQLTPVSEFPATPFKTFDDYYRHKYNIGICNKSQPLLDVDHTSARLNLLTPR
YVNRKGVSLPTSSEESRKAKRENLQQKQILVPELCLIHPFPASLWRKVVCLPCILYRMNH
LLLADSIRMRIVNACGVGKAELPEGFKWKMLTFGWTLTEVLKENAMLKQSVPVTEKEPVN
EERIAEIRNAYLGGLRKGGVELTPDGQLVIDTFDPSKVTIPNDEELLEAELRDIDFHKPK
FDWKPIPGMDEMNFRMGSPSNFEEESDWQMFGDSEMVNISMQGLNWISGEGIDIDKLSAA
LPLQLGGNADDSGDEGSLLEDMRDAEEMLVEDRGDKEEVEHNSLWLSPCSAIQQSKILEG
VYSDVREVCDDLLGLQFRVCKGGRMGVKMNAFPKLKKALDYMEAAAEQDAEDQDLIEEHY
VSSDVVFGELMQGREEMEELPAEIRIRFDDDDSESCGPSPAILLQALTMSNANDGINLER
LETVGDSFLKYAITNYLYCTYLGVHEGKLSFLRSKQISNVNLYRLGKELGIGSLMVATKF
EPSDNWLAPGFCIPEGLEKAVLDSKIPNSHCNISQFKDGEASGEGEFVPYSLLTHHSIPD
KSIADCLEALIGAYLVSCGRCNTLKCMTWFGLRVLPLDCEGDAFASLFKKIPPPLPASYD
ERVLRQLLHGHVSFEERIGYKFKNKGFLLQAFTHASYHYNTLTDCYQRLEFLGDAVLDYL
ITRYLYEDPVKQHSPGALTDLRSALVNNTFFAALAVKYEFHKYFLNLSPRLFKLIHRFVS
TKKHLSGKQYFEKYYLGEDECEEAEEIEVPKALGDIFESVAGAIYLDSGMSLDTTWNVYL
AMMKPEIEYFSKHVPKSPIRELLELEPQTAKFEKAELTLNGKIRVKVEVFGKGSFIGIGR
NKRIAKCTAAKRALRVIKGPRSKAL
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggaatccgaagtttccgccgtcgaagaaaccggctcccgcccagatccgcgct
cggcagaatgtcctcctggagaacgcgcagaagaagcacttcacccctgcggagttccaa
gtcgaattgctcgccgaagctaagcggggagggaacaaagtgatcttcatcagcgtcctc
gataagccgtttttcatcgtcaacttcacgaaagaaaatgggtactggttacgaccacca
tctgcttctatcgataaactgctcgtcgtgtgcctgtcatccacggagatgctttcgaca
ttccaatggctggacgactacaccgatctgacttgcgtgtgccttgatccagacgcggat
gaagatgaaggtctcgagaagcgactgagtaattcgtcggtgatcctgacagtgccaaca
gccatcagcacgctgagtgaattctcgctgaagttttgcacagttctcatcgatcgatgc
gagtcgtacgcagagaccgatatcgccggatcggctaatctgctgaaattgatcgctgac
cgcaaactccgtgtcgtggggctcacgaacgccctctcgggcgtaggcagcgccgagacg
gcacggagccgcatccagaacctcgagaagtattggaaggcgcaggctacggtctgcaat
gatctcaccgtgctttcgaagtacggcccgaagcctgaagagaaagtcctcgaatacgga
atcttctacgccgacaaagatgtagagtacgacatggtactcgatctgattgagaacaat
ctgaagttcctcgaaatgtccctcaagctcaaagggaactattccgaagtcattcaagaa
gccatgaggtacccgatggagttggcctacgtgttcctcacgttggggccgtggtgtgct
gcggaagccgcccaagagttcctcggggaagtctcccgatcgatcgacaatctagaatac
ttgacagatatccagatctcgaagaccaccctacagatcgttttcacatttctacaacaa
ttccttgagctgtgccgtatattggtggacctcgtgaagtgtgatccaagcgaggcaaac
gccatacatcccgacaaactgacgaatttgatggacgccatcctcttgtacaccaaacca
aagatggtcccgtctcaaatttctgaagacgggaaaaaatcgaagccccactgcgttccc
tggcatgaagacccgacggctctgtgtggtctgatcatcgtccggcaccgcatcaccgca
ctagttgtgaatcggtggctcgaaacggtgtcgaagactgtgccgagcttggcattcgtc
aagtcgaacttcataatcggccagacaactctggacggcgacgatccggaattggtcgcc
gccggcctcaccaggcaggaggaagttctccagaaattccgctatcgagactacaacctc
ctgatcacgaccacggccacggaggatactctggagctgccgcactgcaatctcgtggtg
aggttcgatccacccgaaagctacaagagctacattgtctgcaaagcgaaagcgaaagcc
tcgtcgaaatgcgctcgtttcttcattatgctctcccagtacgaaactgccaagttcacc
catctgttcagcgactaccggaagatggagggacttctattggagcgcagtcaccaggaa
gacgtgacgaccgaaggagacgagggagcctccccttcggacctggagcgttgttaccgt
ccctcgagcggagactgtctcgtggcgaccctgagcaactcgatcgcgatcatcaatcgc
tactgtcttcgtttaccctccgacacgttgacgaagcttgctccggttttccgaatcaac
aaactccccgatgacacgtaccagtgtgttctgcgtctgccgatcaacagtccgctgaag
gaagagatcgtcggcgagcccatggcgacgccagtgctcgctaaacaagacgtctcactt
cgggctctggagcgtctgcataagcgaggggagatcgacgaccacctttcccctttcggt
aaagactcgctgaaggcgaaaaccgaagatcaggttgtgcccctcgacgaaacggtagct
cacggtgccgccagaccgggaacaacgaaacgacgtcaatactaccacaagagtttggct
cccccattccagggaacgctcgatacggagacttttttcttgtacaacatttcaatgaag
ctgctctgtgcgattcccgaggagcagaactcgcgggctcggaccatctacgaccctgca
gattccccgcgaggcttcggcttcgtatccggcacgagattgactccactctgtccgttc
ccgatctacacccgatcgggcgaggtcatggtcgacgtcgaagaactgagctgcgctctc
ccactgacagaagaacaaaggaaaaaagcagagttcttccacgcgtatgttttccgtgac
gtcctccgcctagagaagttcccaatgaaattcgacctaaaggcgtcccgagccggcttc
ctgatcattccgatcaccgacggttccgttgagtggtcgtttatcgacagaataatgaac
gaggatgaattcaagccccataaagtcgacgaagaagaacgacgtagcttcaccttcaat
cgagagatatttagcgacgctgtcgtgatgccttggtacaggaacatcgacaaacctcaa
tttttctacgtggcgaacatctgcgagcagctaacacctgtcagtgaattccccgccacg
cccttcaagactttcgacgattattatcgccataaatacaacataggcatatgcaacaaa
tcccaaccactcctcgacgtagatcacacgtcggcgcgtctcaatctcttgacgccgagg
tacgtcaaccggaaaggagtcagtttgccgacgagcagcgaggagtcccgtaaagcgaaa
agagagaacctccaacagaaacagatcctagtcccggagctttgtctcattcatccgttc
ccggcgtctctgtggaggaaagtcgtctgtctgccctgcattctgtaccggatgaatcat
ttgcttctggcggacagtatccgcatgcggatcgtgaacgcttgcggcgtggggaaggcc
gagctacccgagggcttcaaatggaaaatgctcacgttcggctggactctgaccgaggtg
ctgaaagagaacgctatgctcaaacaaagcgtcccggtaacggagaaagagcctgtcaac
gaagaacgtatcgccgaaatccgaaacgcctatctcggaggtctgcgcaaaggcggtgtc
gagcttacacccgacggacagctggtcatcgacacgttcgatccctcgaaagtcacgata
ccgaacgacgaggagctcctggaagcggagctacgtgacatcgacttccataagccgaaa
ttcgattggaaacctatccctggaatggacgagatgaacttccggatgggcagtccgtcg
aatttcgaggaggaaagcgattggcaaatgttcggcgactcggaaatggtcaacattagc
atgcaaggcctcaattggatctcaggggagggcatcgatatcgataaactgtccgccgct
ctgcccctacaactaggagggaatgctgacgacagcggggatgagggaagtctcctagaa
gacatgcgagatgccgaagagatgctcgtcgaggaccggggtgacaaggaagaggtcgag
cacaactcgttgtggctctctccgtgtagcgcgatccaacagtcgaaaatactcgagggc
gtatactcggacgtccgtgaagtgtgtgacgacctcctcggtctccagttccgagtctgt
aaaggaggacgcatgggtgtgaaaatgaacgcattccccaaattgaaaaaagctctcgac
tacatggaggccgccgccgagcaggacgccgaagatcaggatctcatcgaagaacactac
gtcagcagcgacgttgtcttcggtgagctgatgcagggccgtgaagaaatggaggaactt
ccggccgagatccgcatacgattcgacgacgacgacagcgagagctgcgggccgagcccc
gctattctgctgcaggctctgacgatgtcgaacgcaaacgacggaatcaatttggaaaga
ctcgagaccgtgggagactcgttccttaaatacgcaatcacgaattacttgtattgcacc
tatctcggcgtacacgaggggaaattgagcttcttgagaagcaaacaaatctccaacgtg
aatctgtatcgactggggaaggaattgggcatcggctctctcatggttgccaccaaattc
gagcccagtgacaactggctcgctccgggtttctgcattccggaaggtttggaaaaagca
gttcttgactcgaaaattccaaacagtcattgtaacataagccagttcaaagacggtgag
gccagtggtgaaggcgagttcgtgccttacagcctattgacgcaccactcgataccggat
aaaagtatcgcggattgtctcgaggctctgataggagcctatctggtatcctgcggccga
tgcaacacactcaagtgtatgacctggttcggacttagggtgttgcctttggactgcgaa
ggagacgcgttcgcgagtttattcaagaaaattcccccacctctgccggcgagctacgac
gaacgagttttgcggcaacttctccacggccatgtcagtttcgaggaaaggatcggatat
aaattcaaaaacaaaggattcctccttcaagcgttcacgcatgcatcgtaccattataat
actttgaccgattgctatcagcgactggagttcctcggagacgcggtgctcgattatctt
atcacgcgatacctgtatgaggatccggtgaaacaacatagccccggcgccctgaccgat
ctgagatcggcgctggtgaacaacacattcttcgcagcgttggcggtcaaatacgagttt
cacaaatatttcctgaatctttcgccgaggctcttcaaattaatccaccgctttgtcagc
acgaagaaacacttgagcggcaagcagtacttcgaaaaatactatctcggagaggatgaa
tgcgaggaagccgaagagatcgaggtgccgaaggcactcggagatatattcgaatccgtc
gctggagcgatctatctggattctggcatgtcgctcgacacaacttggaacgtctatctc
gccatgatgaagccagagatcgagtatttctcgaaacatgtgcccaaatctcctattcga
gaactgctcgaattggagcctcaaaccgcaaagtttgaaaaagcagagctgaccttgaac
gggaaaatacgcgtgaaggttgaggttttcgggaagggcagctttatcggtatcggacgc
aacaaacgaatagccaagtgtacagcggccaagagggctcttcgggtcatcaaaggtccg
aggagcaaagcactgtga
DBGET
integrated database retrieval system
