Galendromus occidentalis (western predatory mite): 100900728
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Entry
100900728 CDS
T11057
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
goe Galendromus occidentalis (western predatory mite)
Pathway
goe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
goe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100900728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goe03400
]
100900728
DNA repair and recombination proteins [BR:
goe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100900728
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
100900728
NCBI-ProteinID:
XP_003742162
UniProt:
A0AAJ6QS84
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MHEFANRTPVLRTDDENKDPVDRGADSPSTSKDGTPKSRRLLGASNDSTPKSSATNSVTP
KRANSKSTPKTASKNAKSSSSPTNTPKSRKSLTASGKKGSASKRKPVKQENGVKPKLKRA
RLEEDSGEEDWMESDPLESEEEDVSSGDDYEPKKDESDLEESYNDDVESEGEVTTPSEDD
GSGLDSPVKKTPRRAQRTPAKAPATPKTPSSSLAQSVSRNPSEWLHLSYEFLKEPKDLSG
KKIGDADYDPSTLHVPNSFKNSLTPGVRQWWELKSRHFDTVLFFKVGKFYELYHMDAVIG
VENLGLTYMKGDWAHSGFPEVALQRNMEALIQKGYKCARVEQTETPSMMEQRCKTSGKSS
KFDKVVRREICNVSSKGLQLCGADAVPGSSYCLALFSKERRFGVCLVDSTVGRFHIGEFE
DDHQLSSLRTLISRFAPVEAILERSISADVKRIVEAIGAIIDQPAKNKFLSAEKALTLIR
EGDYFKGNEYPQALKGLIAENDPLMSTPRAGCELAVAALASIVGRLQEALILEDVLTMVE
FETIEFKFEGGKGDYLPKIMIMDSVALTNLEIFENSVGTSEGSLISTINFCSTAFGLRHL
KKWLLGPSCVSEEIESRWDAVGELMENFSLLKTLQERLKKLPDMDKMLARIHSLSLKKTD
HPDSRAILYSDDVYSKRKIEDFCNVLDGFREAQAICKLVRDKDLKSSLLRDLTHLTTEGG
HFPDVKEALNYFDKAFDKTKALKDGKIVPAPGVDEEFDEAQRRVAEVKDSLDEHLQQQMK
HFGTSKISYTGTGRTAYQIEVPESVAGKATEDHTLEGHKKGFKRYYTRRGKSLCDEMIKA
EEMRDAVSKDLMRRIFHAFDEKRPLWKKVIECLSNLDCLMSLALYGNNAGGSVCRPKINH
ESQKAIIRIVNGCHPCLLKKLGEDKLIANDFTLGTVEEGRCDGSSVALLTGPNMGGKSTL
MRQVGLLVVMAQLGAWVPAEEMEFSLVDRIFTRLGASDHITLGESTFLVEMLETSAVFKH
ATKHSLVLLDELGRGTSTNDGASLAYAVLAELSKSNRRTLFSTHYHDLAKDIQGVYLGHM
ACVVENDEDVVFLYKFVPGNCEKSFGFNVARLAGLPQRIVTMGLQRAKELEEQSDLLQRF
VKFMSL
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagtttgcgaatcggacacctgttttgcgtacagatgacgaaaataaagacccc
gtagaccgaggcgccgactcgccctccacgtccaaggatgggacaccgaaaagccgtagg
ttgcttggagcatcaaatgactctacaccgaagtcgtcggctacgaattccgtcactcca
aaaagagcgaactcgaaaagcacaccgaagacagcttcgaagaatgccaagagctcctct
tcaccgacgaataccccgaagagccgtaaaagtctcacggcttctgggaagaagggctcg
gcgagcaagcggaaacctgtcaaacaagagaatggagtcaaacccaagctgaaacgggcg
agactcgaagaggattccggagaggaggactggatggagtcggacccactggagtctgag
gaggaagacgtctcttcgggcgatgactacgagccgaaaaaagacgagagcgatctagaa
gaaagttacaacgatgatgtcgaatctgaaggagaagtgaccacgccgtcagaagatgac
ggatctggactggattcgcccgtcaagaagacccctcgacgcgcccaaagaactccggcc
aaagcccccgcgacgccgaaaacaccgtcatcctcattggcgcaatctgttagtcggaac
ccatcggaatggctgcatctgagttacgaatttctgaaagagccaaaagatctgtcgggg
aagaaaatcggcgatgcggactacgatccgtcgactttacacgtgcccaacagcttcaaa
aacagcctaactccgggcgtgcggcaatggtgggagctcaagtcccgacatttcgacacg
gtgctctttttcaaagtcggaaaattttacgagctgtaccacatggatgccgtgattgga
gttgagaacctcggtctgacttacatgaaaggggactgggctcattctggattcccggaa
gtggcgcttcaacgcaacatggaagcacttatccagaagggttataaatgcgctcgggtt
gagcagaccgaaactccgtcgatgatggaacaacgctgtaaaacttcgggcaaatcctcg
aaattcgacaaagttgtgaggcgtgagatttgcaatgtctcctccaaaggactgcagttg
tgcggagcggatgcagtccccgggagctcgtattgcctcgccctcttcagcaaagaaaga
cgtttcggagtgtgtcttgtggattccactgttggacgcttccacatcggtgaattcgaa
gatgaccatcagttgtccagcctccggaccctaatcagccgtttcgcacctgtcgaggcg
attctagagaggagcatcagcgccgacgtgaagcgcatcgtggaggcaatcggtgctatt
atagatcagccagccaaaaataaatttctatcggccgaaaaggctctgacgcttattcgc
gagggagactacttcaaggggaatgaatacccccaggcattgaaagggctcattgccgag
aacgatcccctaatgtcgactcctagagccggatgtgagctcgcggttgcggctctggca
agcatagttggtcgtttgcaggaagctctgatcctcgaggatgtcctgaccatggtggaa
ttcgaaaccatagagttcaagttcgaaggaggcaagggagattatctgccaaagatcatg
atcatggactcggtggcgttgaccaatttagagatattcgaaaacagtgtggggacatcc
gagggctcgcttatatcaacaatcaatttctgttcgacggcattcggactccgacatctc
aaaaaatggctccttggcccatcgtgtgtttccgaagaaatcgagtcgcgctgggacgct
gttggagagctgatggagaatttctccctgttgaaaacactgcaagaacgtctgaagaaa
ttgcccgacatggataagatgctggccaggatacattcgctgagtctcaagaagaccgac
catccagattctcgagcgatactctacagcgatgacgtctattccaaacggaagatcgaa
gatttctgcaacgttctcgatggcttccgagaagcccaggcgatttgcaagctggtccgc
gataaagatctcaagtcgtctcttctcagggacttgactcatctgacgacggagggaggg
cacttccccgacgtgaaggaggctctcaattacttcgataaggccttcgataaaacgaag
gcgctcaaggacgggaaaatcgtccccgctcctggagtagacgaagagttcgatgaagct
cagaggagggtagccgaggtgaaggacagtctcgatgagcatctccaacagcaaatgaaa
catttcggaacttcgaagatctcttacacaggaacgggtcgtaccgcgtatcagatagag
gtccccgagagcgttgcggggaaggctaccgaagatcatacgctagagggtcacaagaaa
ggtttcaaacgctattacactcgtcgaggaaaaagtctttgtgacgaaatgatcaaagcc
gaagagatgcgcgacgctgtgagcaaagatctcatgaggagaatattccatgcgttcgac
gagaagaggcccctctggaagaaagtgatcgagtgcctttccaacctggactgcttgatg
agcctcgctctctacggcaacaacgctggtggttcggtttgcagaccgaaaatcaatcac
gagtcacagaaggccataatccgtatcgttaatggatgtcatccgtgtttgctgaagaaa
ctcggggaggataagctcatcgccaacgatttcactctgggcaccgtcgaggaaggaaga
tgtgatgggagctctgtggctctgctcacagggccgaacatgggcggtaaatccacgctc
atgcgtcaagtgggcttgctggttgtgatggctcagcttggcgcttgggttcccgccgag
gaaatggagttcagcctggtagaccgaatctttacccgtctcggagcgtcagatcacatc
actctcggggagtcgacattcctcgttgagatgctagaaacttcagcagttttcaaacac
gccacgaaacattcgctggtgctcctggatgagttgggtcgcggcacatcgaccaacgat
ggagcgtctctcgcgtacgcggtcttggcggaactctcgaaatcgaatcggagaacgttg
ttctcaactcactatcacgatctcgcgaaagatatccaaggagtttatctcggtcacatg
gcttgcgtggtcgaaaacgatgaagatgtcgtgttcctctacaaattcgttccgggtaac
tgcgagaagagcttcggcttcaatgtcgccagactcgccggactcccgcagcgaatcgtc
actatgggtctccagcgcgcgaaagaactcgaagagcaatcggacttgcttcagagattc
gtgaagttcatgtctctttga
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