KEGG   Galendromus occidentalis (western predatory mite): 100901420
Entry
100901420         CDS       T11057                                 
Name
(RefSeq) eukaryotic initiation factor 4A-III
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
goe  Galendromus occidentalis (western predatory mite)
Pathway
goe03013  Nucleocytoplasmic transport
goe03015  mRNA surveillance pathway
goe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:goe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100901420
  09122 Translation
   03013 Nucleocytoplasmic transport
    100901420
   03015 mRNA surveillance pathway
    100901420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:goe03019]
    100901420
   03041 Spliceosome [BR:goe03041]
    100901420
   03009 Ribosome biogenesis [BR:goe03009]
    100901420
   03012 Translation factors [BR:goe03012]
    100901420
Enzymes [BR:goe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100901420
Messenger RNA biogenesis [BR:goe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100901420
   mRNA cycle factors
    Stress granule specific factors
     100901420
Spliceosome [BR:goe03041]
 Complex C
  Other components
   EJC/TREX
    100901420
Ribosome biogenesis [BR:goe03009]
 Eukaryotic type
  90S particles
   Helicases
    100901420
Translation factors [BR:goe03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    100901420
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_30 AAA_22 TniB UvrD-helicase
Other DBs
NCBI-GeneID: 100901420
NCBI-ProteinID: XP_003748087
UniProt: A0AAJ6QYH1
LinkDB
Position
Unknown
AA seq 401 aa
MAARSKRQNPDEMATLEFETSDGVEVINSFDSMGLREDLLRGIYAYGFEKPSAIQQRSIQ
PIMKGRDVIAQSQSGTGKTATFSIGVLQKIETQTRETQVLILSPTRELALQIQKVILALG
DYMSVQCHACIGGTNLAEDIRKLDYGQHIVSGTPGRVFDMIKRRNLRTRGIKMLVLDEAD
EMLNKGFKEQIYDVYRYLPPGTQVVLISATLPHEILEITNKFMTDPVRILVKRDELTLEG
IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLSQKMLEANFTVSSMHGD
MPQKERDSIMKEFRSGATRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR
FGRKGVAINFVKNDDIRILRDIEQYYATQIDEMPMNVADLI
NT seq 1206 nt   +upstreamnt  +downstreamnt
atggcggctcgaagcaagcggcagaatccggacgagatggcaaccctcgagttcgagact
agcgacggcgttgaggtcataaactcgttcgattcgatgggtcttcgagaggatcttctg
cgtggaatctacgcctatggtttcgaaaaaccatctgcgatccagcagaggtcaatccaa
ccgatcatgaagggccgcgacgtgatcgcacagtcacaatccggaaccggaaaaaccgcc
acattctcaattggtgttctccagaaaatcgagacccaaacacgtgaaacacaagttcta
atcctctcgcccaccagggagttggccctgcaaattcagaaagtcattctggctttgggc
gattacatgagcgtgcagtgccacgcttgcatcggtggaacgaatctcgctgaagatatt
cgcaaattagattacggacagcatatcgtcagcggaacacctggtcgggtgttcgatatg
atcaagagaagaaatctccggacccgcggtattaaaatgctcgtactcgacgaagccgac
gagatgttgaacaagggcttcaaggaacaaatctacgacgtttatcgatatcttccaccg
gggactcaggtcgtccttatctctgcaacactcccgcacgagatccttgaaatcaccaac
aaattcatgaccgatcctgtccgcatcttggtgaaacgtgacgagctgacattggaagga
atcaaacaattcttcgttgcggtcgagcgcgaagaatggaaattcgacactttgtgcgat
ctctacgatactctgactatcacccaagccgtcatattctgcaacacgaaaaggaaggtc
gactggctctcacagaaaatgcttgaagccaatttcaccgtgagttccatgcacggagac
atgccgcagaaagaaagagactcgatcatgaaggaattccgctctggagcgacccgcgtc
ttgatcaccaccgacatttgggcgcgaggtatcgacgttcaacaagtttctctggttatc
aactacgacctgccgaacaatcgtgaactgtacattcaccgcatcggtcgttccggccgt
tttgggaggaaaggtgtcgccatcaatttcgtcaagaatgatgacataaggatcctccgc
gatattgaacagtactacgcgacacaaatcgacgaaatgcccatgaacgtggctgacttg
atctag

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