Galendromus occidentalis (western predatory mite): 100904404
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Entry
100904404 CDS
T11057
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
goe Galendromus occidentalis (western predatory mite)
Pathway
goe03015
mRNA surveillance pathway
goe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
goe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100904404
09123 Folding, sorting and degradation
03018 RNA degradation
100904404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goe03019
]
100904404
03041 Spliceosome [BR:
goe03041
]
100904404
Messenger RNA biogenesis [BR:
goe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100904404
mRNA cycle factors
Stress granule specific factors
100904404
Spliceosome [BR:
goe03041
]
Complex C
Other components
Complex C specific factors
100904404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_5
Nup35_RRM_2
RRM_Nup35
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
100904404
NCBI-ProteinID:
XP_003740776
UniProt:
A0AAJ6VWS6
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MNSGGGNYTMASLYVGDLDPDVTESMLFEKFCQAGPVLSIRVCRDMISRRSLGYAYVNFH
QPGDAERALDTMNFEPLKNRPMRIMWSQRDPSLRKSGVGNVFIKNLHKDIDNKAIFDTFS
AFGNILSCRVATDEQGNSRGYGFVHFETEEAANEAINKVNGMLLNEKKVFVGKFVPRSER
ERMMGDKARLFTNVYVKNFGEELDDGKLKEMFEVYGKITSARVMTDQTGKSRGFGFVSFE
NPDNAEQAVKELNDKELGNGKKIYVGRAQKKAERLSDLKRKFEQLKMERMTRYQGVNLYV
KNLDDVIDDERLRREFAPYGTITSAKVMMDSTGARSKGFGFVCFSSPEEATKAVTEMNGR
IIVQKPLYVALAQRKEDRRAHLSSQFVQRFTGVRVPFGQMPFNHSTPTSFIVPASMHPRA
FFASGNVANNVRPQRWAGGQQIRVSGQYAMAGGAPMATAAAANFQRAPRPTMQGQNAGVA
AARNATMSSTRPITSTIHGAAGSGTQSRNRVGVAPQQAPNSRPTFKFTNSVRNAQPSTPA
GAAPMNASNAVLVQGQEPLTTQMLAEACPRDQKQMLGERLFPLIYAMHADLAGKITGMLL
EIDNSELLHMLEHSESLRAKVEEAVAVLQAHQAKEEISRTQNPPDAPKTMAEVVAAGKKD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaattccggcggaggtaactacaccatggcgtctctgtacgtcggagacctggatcca
gatgttacggagtcgatgctgttcgagaagttctgccaagctgggcccgtgctctccatc
agggtatgtagggacatgatcagtcgtcgctcgctcggctatgcctacgtgaacttccat
caaccgggcgatgccgagcgtgcgttggatacgatgaatttcgagccgctcaagaaccgt
cccatgcgtatcatgtggagccagcgagacccttcactccgtaagtccggcgtcggcaat
gtcttcatcaagaacctgcacaaagatatcgacaacaaggcgatcttcgatacgttctcg
gcgttcggcaacattctatcgtgccgagtggcgaccgacgagcagggcaactcacgcggc
tacggatttgtgcatttcgagaccgaagaagcagctaatgaagctatcaacaaagtcaac
ggtatgttgctgaacgagaagaaagtcttcgtcggcaagttcgtgccccgatccgaacga
gagcgcatgatgggcgacaaggcccgcctcttcaccaacgtgtacgtgaagaacttcggt
gaagagctcgatgacgggaagctcaaagagatgttcgaggtttacggaaagatcacctca
gctcgagtcatgaccgaccagaccggaaaatcgagaggcttcggctttgtttcattcgag
aatcctgacaacgctgaacaggctgtcaaggaacttaacgacaaagagctcggaaacggc
aagaaaatatatgtcggtagagctcagaagaaagccgagcgcctctcggacctcaagagg
aaattcgaacaacttaaaatggaacgtatgactcggtaccaaggggtgaatctctacgtt
aagaacctcgacgacgtcatcgacgatgaaagactacgacgtgaattcgcgccatacggt
acgatcacctctgccaaggtaatgatggactcaacaggagcccgttcgaaaggattcgga
ttcgtgtgcttctcatctcccgaagaggccaccaaggctgtcacggagatgaacggtcgc
atcatagtacagaaacccctgtacgttgccctggctcagaggaaggaggaccgtcgcgct
catctgagctctcagttcgtccaaagattcacgggagtgcgcgtaccattcggccaaatg
cccttcaatcattccactccgacgagcttcattgtgccggcctcaatgcacccgcgggcc
ttcttcgccagcggaaacgttgccaacaacgttcgcccccagagatgggcgggaggacag
cagatccgcgtctcaggccaatacgccatggccggaggagctccgatggccacggcagcc
gccgccaacttccagagagcaccgcgtcccaccatgcagggtcagaacgccggggttgcg
gccgctcgcaacgcgacaatgagttcaacgcgccccataactagcacgatccacggcgcc
gccggctctgggactcagagcaggaaccgcgtgggagtcgcaccccaacaagcgccaaac
agccgccccacattcaaattcactaacagcgttcgcaatgctcaaccgtctacgccagct
ggtgctgcgccgatgaacgccagcaacgccgtgctcgtccaaggccaagaacccttgacc
actcagatgttggccgaagcctgcccaagggatcaaaagcagatgctgggagaacgacta
ttcccattgatctacgccatgcatgcagatctcgcaggaaagatcacaggaatgttgctc
gaaatcgacaactctgaacttctgcacatgctcgagcacagcgaaagtctccgagccaaa
gtcgaggaagccgtggccgtactccaggcccatcaagccaaggaggaaatctcacgaacc
cagaacccgcctgatgcgcccaagacgatggccgaagtcgtcgctgccggcaagaaagac
taa
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