Galendromus occidentalis (western predatory mite): 100906661
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Entry
100906661 CDS
T11057
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
goe Galendromus occidentalis (western predatory mite)
Pathway
goe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
goe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100906661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goe03019
]
100906661
03041 Spliceosome [BR:
goe03041
]
100906661
Messenger RNA biogenesis [BR:
goe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100906661
Spliceosome [BR:
goe03041
]
Complex B
Other components
Prp19-related factors
100906661
Complex C
100906661
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
TPR_8
TPR_2
Mad3_BUB1_I
ARM_TT21_C
MIT
Motif
Other DBs
NCBI-GeneID:
100906661
NCBI-ProteinID:
XP_003745749
UniProt:
A0AAJ6QVU4
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
MAEAGNEEPMAQAEASLIPSDLLSEEDHLAYEEELLRNPFVVRSWLRYAEFRKSRKCTKA
QVNIIFERALTQLPGSYKIWHYYLQEIMKQLDEQHLCIDHSDFEAVNKTFERALVWMHKM
PRIWIMYCEFLHRQRFVTRLRHTLDRSLRSLPITQHDRIWPLYLKFISFHDIPETGLRVY
RRFLKLSPESRETAVEYLISVGKLNEAAQRMADMVNDPSFTSAEGKSKHQLWMELCELMS
KNPDKMQSLNVDAIIRGGLKKYTDQLGKLWCSLADYYIRSKLFERARDIYEEAMSSVLTV
RDFAQIFDAYSQFEYTVISKLMAKDTMSPEEELDLELKLSRYEYLMNRRPLLLNSVLLRQ
NPHSVHEWLKRVKLLEDDPVEVIKTYTKAVTTVDPKLASGGKLSQIWTEFAKFYESKGQL
DDARIIFRKATQVPYTKVDELANVWCEFAEMELRHDNPTEAIKLCRTATSAPSRKVAYHD
QSETVQMRLYRNIKIWSLYADLEESFGTLQSTKAVYDHMIDLRIASPQIIINAALFLEEN
NYFEEAFRLYEKGIGLFKWPNVYDIWNTYLTKFLKRFGGNKLERARDLFEQCLADCPPKY
IKNIFLLYAQLEEQYGLARHAMAVYDKAEDLVPDEEKKEMFDLHIKLAATRFGLTKVRPI
YQKAIETLPDADSVKMCIEFAQLECKLGEIDRARMIYMHCSQMCDPRRQQVFWEEWKRFE
VAHGNEDTLRELLRIKRSVQATFNTQMSVSLTAAQASAAEGEAAAAVVESVTISKGPVFI
RAQDTQPALEESKVHNPDEIEVPDEDDEENDNNDEEMDTVETRAVPDEVFGAIAKQDA
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggctggaaacgaggagccgatggcgcaggcggaggcgagcctaattccttcg
gatcttctgtctgaggaggaccatctagcttacgaagaagagctcttgagaaacccattt
gtcgtgcgctcgtggctccgctatgccgagttccgaaagagcaggaaatgtacgaaagca
caagtcaacattattttcgagcgtgcgctgacgcaactccctggatcgtacaagatctgg
cattactacctccaggagatcatgaaacagctcgacgaacagcatctgtgcatcgatcat
tcggattttgaggccgtcaacaagacattcgagcgcgctctggtctggatgcacaaaatg
cctcgaatctggatcatgtactgcgagttccttcaccgtcaacgattcgtcacccggctc
cgacacacgctcgatcggtctttacgttcgttgccgataactcaacacgatcgaatctgg
cctctttacctaaagtttatatcgttccacgacattcccgagaccgggctgagagtctac
cggcgcttcctgaagctcagtcccgagtcgcgagagacggcggtcgaatatctgatctca
gtcggaaagctaaacgaagccgcgcagagaatggccgacatggtgaacgacccgagcttc
acgtcggccgaaggaaaatcgaagcatcagctgtggatggaattgtgcgaacttatgtcg
aaaaaccccgacaagatgcagagcctgaacgtcgacgcaatcatcaggggcgggctgaag
aagtacacggaccagttggggaagttatggtgctctctcgccgactattatatccgctcg
aaattgtttgagcgcgcacgtgacatctacgaggaggcaatgtcgagcgtgctgacggtg
cgtgacttcgcgcaaattttcgatgcctattcccagttcgaatacacggtcataagcaag
ctgatggcgaaggatacgatgtcgccggaggaggagctcgacctcgagctaaaattgtct
cgatacgaatatctgatgaatcgcagaccgctgctcttgaactcggtcctcctgcggcag
aaccctcacagcgttcacgagtggctgaaacgagtgaagctgctcgaagacgatcctgtc
gaggttataaaaacgtacacgaaagcggtcaccaccgtcgatccgaagttggccagcggt
ggtaaactttcccagatctggaccgagttcgcgaagttctacgagtccaagggccagctc
gatgatgctaggataatcttccggaaggccacgcaggtgccctacacgaaagtcgatgag
ctcgcgaacgtgtggtgtgaatttgccgaaatggagctgcgtcacgacaaccccaccgaa
gccataaaactctgccgtacggcaacgtctgcgccgtcacgtaaagtggcctaccacgat
cagtctgaaacagtacaaatgcgtctctatagaaatatcaagatctggtcgttatacgcc
gacctcgaagagagtttcggcacgttgcagagcactaaagccgtctacgatcatatgata
gatctgcggatagcgagtccgcagataatcatcaacgcggcgcttttcctcgaggagaac
aattacttcgaggaagcgttcagactgtacgaaaaaggcatcggcttattcaaatggccg
aacgtctacgatatatggaacacgtatctgacgaaatttctcaagcgcttcggtggaaac
aagctcgaaagagcgagagacctcttcgagcagtgtttggctgattgtccgccgaagtat
atcaagaacatattcctgctctacgctcaactcgaagagcaatacggactcgcgcgacac
gccatggccgtctacgataaagctgaagatctcgtgcccgatgaagagaagaaagaaatg
ttcgacctccatatcaaactggcagcgacgcgtttcggtctcacgaaagtccgtccgata
taccagaaagccatcgaaactctgcccgacgcggattctgtgaaaatgtgtatcgaattc
gcgcaactcgagtgcaagctcggcgaaattgaccgcgctcggatgatctacatgcattgt
tcccagatgtgcgatccccggagacagcaggtgttctgggaggaatggaaaagatttgaa
gttgcgcatggcaacgaagatacgctacgtgagctcctccgtataaaacgaagcgtccag
gcaactttcaatacccaaatgagcgtgagccttacggccgcgcaagcatcggcagccgaa
ggcgaggcggccgccgctgttgtcgaatcggtcacgatttcaaaaggcccggtattcatc
cgggcacaagacacgcagccagcgttggaagaatctaaagtgcacaatccggacgaaatc
gaagtaccggacgaggatgacgaagaaaacgacaacaacgatgaggaaatggataccgtt
gagaccagagccgtacccgatgaagttttcggggctattgcgaaacaggatgcgtga
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