Galendromus occidentalis (western predatory mite): 100907148
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Entry
100907148 CDS
T11057
Name
(RefSeq) helicase SKI2W
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
goe Galendromus occidentalis (western predatory mite)
Pathway
goe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
goe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100907148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goe03019
]
100907148
Enzymes [BR:
goe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100907148
Messenger RNA biogenesis [BR:
goe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100907148
mRNA degradation factors
3'-5' decay
Ski complex
100907148
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
Helicase_C
DEXQc_Suv3
ResIII
Ski2_beta-barrel
MTR4-like_stalk
NACHT
ATPase_2
DUF3516
Motif
Other DBs
NCBI-GeneID:
100907148
NCBI-ProteinID:
XP_028968060
UniProt:
A0AAJ7SG88
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MDLVFDPKDLRLVAQSNPDRVDLFYEPGSLPRTVGSTPFPPPPLFESTQQEDLEKDISNF
LLKPPALDLPRVIPDVYDLLRADVQPSCIQLKPIRDLATGDVKGISEVIPPSAPVEVDFD
ELLSRPPGFERDVDFEKSSDIVERGSPARENRLDNLQDILATLPDLVEVVEDSKASPDAD
NVVELEKSEELDRIPDVQLNEVLHISDMPTLPTKTRWAEVVDISQPVTNYEELNPNPAYS
WSFELDTFQKKAVLLMEKGENVFVSAHTSAGKTVVAEYAIALSRRHMTKAIYTSPIKTLS
NEKFRDFRETFDEVGIVTGDVQINRDAATLIMTTEILRSMLYNKASIIDDLEWVIFDECH
YINDAERGVVWEEVLIMLPSHVNLVLLSATVPNALNLADWIGRIKQKRIHVIATTKRPVP
LEHYLYVGRIGASSEQKQALKAKATPEAVKLPDQALLILDSAGQFKSQNYLKVCAAKKST
SNNWRGPDERSRYLTLLQYLQKKDACPAILFTLSRKRCDDNAASLANVDMTTATEKSQIH
RFIAQCTARLSSEDRRLPQVETLKLLLKNGIGVHHSGILPIMKEVVEMLFQRGLIKILFA
TETFAMGVNMPARTVVFDRIRKYDGCQFRDLLPAEYIQMAGRAGRRGKDTVGTVLIMIHS
DVPDSGSLQTMMMGKPHSLQSKFKVTTAMILNLKAGLQRRVEDLMRQSFIEDENQSQVDQ
MVKTRDKLRTDLENIESLKCDSCVDIESCLSTLEQLAANRRALWDKILEFSSAPKLLPTG
RVLVFRRDGEAPRLGVIASFNSKQKQISVVSLAEKAESECYWPASRKITTSSNPKCEQLT
IGAGEILDLSTTDVRIDVKSLGTPKGLREAGQNVFEMVERWDFTKFNISKELKGAGLDLA
EQLQTSNYWEQRVLSHSCAQCPLFESHSRMAQKVISVQSELDRVNLMLSEEGMRMMPEYH
KHLALLERLGYLEPNGPLKLKGRIARAMSNHEILLSELLVGDVLIKCKPAELAALLSVFV
YQGKSDENEEADIPEPVEEIMQEFKALALSIGAVRRECGFDEDPQTYLDQYNRGLVNVVY
NWASGMTFGQIMQIAENQQEGTIVRCIQRLDELLGHVRDAAKVIGNPELHSKVEQASVLI
RRDIVFAASLYLE
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggacttagttttcgacccgaaggatctccgtttggtcgcacaatcgaatcctgaccgc
gtagaccttttctacgagcctggatcgctgccgcgaaccgtcggtagcaccccatttcct
ccgcccccgctcttcgaatcgactcagcaagaggatttggaaaaagacatatccaatttc
cttctgaagccgcctgctttagatctgcccagggttatacccgatgtgtacgatctactg
agagccgacgttcagccgtcctgcatccaattgaaaccgatcagagatctcgcgactggg
gacgtgaaaggaatttctgaagtcatcccgccgtcggcacccgtcgaagtggacttcgac
gagctcctctccagacctccgggattcgagcgtgatgtggacttcgagaaatcttccgat
atcgtcgagaggggcagcccagccagggagaaccgtttggacaacttgcaagatatcctg
gccactctgccggatctggtggaagtcgtcgaagattccaaagctagtcctgacgcagac
aatgtggttgagctcgagaaatccgaggagttggatcgtatccccgacgttcagctgaac
gaagttctccatatcagcgacatgcctactcttcccaccaaaaccagatgggcggaggtc
gtggatatctcgcagccagtgaccaattatgaagaactcaatcccaacccggcttactcg
tggtctttcgaactggacacttttcagaagaaagccgtactcctcatggagaagggcgag
aatgtcttcgtttctgcgcacacatccgcaggcaagacggtcgtcgcggaatacgcaatc
gctctcagccgaaggcacatgacgaaagctatctatacgtctcctataaaaacactgtcg
aacgagaaattccgagattttcgcgagacattcgatgaggtcggaatcgtgaccggggac
gttcagatcaatcgtgacgccgcaaccctgatcatgaccacggaaattcttcgctcgatg
ctctacaacaaagcctcgataattgacgatcttgaatgggtgatattcgatgaatgccac
tacataaacgatgccgagcgcggggtagtttgggaagaagtactaatcatgttgccgtcg
cacgttaatctggtcctgctatccgctacggttcccaacgccttgaatctcgccgactgg
attggccgcatcaagcaaaagcgcatccatgtgatagcgaccacgaaacgtccggtccca
ctcgagcactacctatatgtcggccggatcggtgccagcagcgagcagaaacaagcactg
aaggccaaagccactcccgaggcggtcaagttaccggaccaggcgctgctcatcctggat
tctgccggacagttcaagagtcaaaattacctcaaggtctgcgcagcgaagaagtcaacg
tcgaataattggagggggcctgacgaaaggagtcgctacttgacgctgctgcaatacctt
cagaagaaagacgcctgtcccgcgattctcttcactttatcacgcaagcgttgcgacgac
aatgcggcgtcactcgccaacgtcgacatgacaacggcaacggagaagtcgcagattcat
cgcttcatagcccagtgtacggcgcgactgtcttcggaggatcgccgtcttccccaagtg
gagacgctgaagcttcttctgaagaacggaatcggagttcatcacagcggaattctgccg
atcatgaaagaggtggtcgagatgctcttccagagaggcttgataaaaattctcttcgcg
accgaaacatttgccatgggcgtcaacatgcccgcgaggacagtggtattcgacagaatt
cggaaatacgatggatgtcaattccgtgatctgctaccggccgagtacattcagatggcg
ggcagggccgggcgcagagggaaagacacggtcggaacggtcttgatcatgattcactcc
gatgtgccagattccggctctctgcaaacgatgatgatgggcaagccgcatagtctccaa
tcgaagttcaaagtgacgaccgcgatgatactcaatcttaaagcaggacttcagcggaga
gttgaggatttgatgcgacaatctttcatcgaggatgagaaccagtcccaagtcgatcag
atggtgaagacccgcgacaagctgaggacggatctcgaaaacattgagagcttgaaatgc
gacagctgtgtcgacatcgagagttgcctgagcacattggagcaactggcggcgaacagg
agagcgctttgggacaaaattctcgagttttcctcagcccccaaactcctgccgaccgga
agagttctcgtattccgcagagacggcgaagcgccgcgactcggggtcatcgcatcgttc
aactcgaaacagaaacagatctctgtcgtctcattggcggagaaggcggaatccgagtgc
tactggccggcttccagaaagatcaccacgagctctaatccgaaatgcgagcagctcacg
atcggagccggcgagattctcgatctctcaacaaccgacgtccgtatcgatgtgaaaagc
ctcggaacgccgaaaggtcttcgcgaagcgggccagaacgttttcgaaatggttgagcgg
tgggatttcacaaaattcaatatctccaaggagctgaaaggagctggtctcgatctcgcc
gaacaacttcaaacgtcaaactattgggaacaacgtgtgctttcccattcctgtgctcag
tgtccgttgttcgagagccattctcgaatggcgcaaaaagtcatatccgttcagtcggaa
ctggatagagtgaatctcatgttgtccgaggaaggaatgaggatgatgcctgaatatcat
aaacatctcgcgctcctagagaggctcggctatctcgaaccaaatggaccgctaaaactc
aaaggaagaattgctcgagcgatgagcaaccatgaaattctgctctcggaacttctggta
ggggatgtcctcatcaaatgcaagcccgccgaattggcagcgctcctgtccgtcttcgta
tatcagggaaaatcggacgaaaacgaggaggccgatatcccggagcctgtcgaagaaatc
atgcaagagttcaaggcgctcgcgctgtccatcggtgcggtgcgtagagaatgcggtttc
gacgaagatccccagacgtacctcgaccagtacaaccgaggcttggtcaatgtcgtttac
aactgggccagtggcatgactttcggccagatcatgcagatcgcggagaatcagcaggaa
gggacgatagtgagatgtatacagagacttgacgaactgctcggtcacgtcagagacgcg
gcaaaggttattggcaacccagaactgcatagcaaagtagagcaggcttctgttttgatc
cggagagatatagtattcgctgctagtctgtacttggagtaa
DBGET
integrated database retrieval system
