Galendromus occidentalis (western predatory mite): 100907515
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Entry
100907515 CDS
T11057
Name
(RefSeq) LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1
KO
K12618
5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
goe Galendromus occidentalis (western predatory mite)
Pathway
goe03008
Ribosome biogenesis in eukaryotes
goe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
goe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100907515
09123 Folding, sorting and degradation
03018 RNA degradation
100907515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goe03019
]
100907515
03009 Ribosome biogenesis [BR:
goe03009
]
100907515
03016 Transfer RNA biogenesis [BR:
goe03016
]
100907515
03036 Chromosome and associated proteins [BR:
goe03036
]
100907515
Messenger RNA biogenesis [BR:
goe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100907515
mRNA degradation factors
5'-3' decay
5' exonucleases
100907515
Ribosome biogenesis [BR:
goe03009
]
Eukaryotic type
Pre-60S particles
RNases
100907515
Transfer RNA biogenesis [BR:
goe03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
100907515
Chromosome and associated proteins [BR:
goe03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100907515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_N
XRN_M
XRN1_D2_D3
XRN1_D1
WW
SH3_12
Motif
Other DBs
NCBI-GeneID:
100907515
NCBI-ProteinID:
XP_028967329
UniProt:
A0AAJ7SF29
LinkDB
All DBs
Position
Unknown
AA seq
2090 aa
AA seq
DB search
MGVPKFYRWISERYPCLSTVAREYQLPDFDNLYLDMNGIIHVCSHPNDADAHFRITEAEI
FKNIFDYIDFIFRMVKPKKYFFMAVDGVAPRAKMNQQRDRRFRSAKEAHESEKQAKQKGE
ELPTDKRFDSNCISPGTEFMERLHEQLKYFVVMKLSTDPVWQRPNLKIHLSGHDAPGEGE
HKAMDFIRYIRSQDDYDPNTRHCIYGQDADLIMLALCTHEPHIALLREEIVYGKNTQKRV
QSADKVTFHLLHVNLLREYLDHEFSELKAPGVLKQGYNLENIIDDWLLMCFLVGNDFLPH
LPNLHIAHDALPILHKTYCSVLPTVDGYLHEQGKLNLKNFEVFLKKLGERDREMFERIEE
KHPDGMKKTERTEMEAARKKFPGLDIPDVDSDEDIWEEEFRQRKRHYYMSKMGYDEVTES
VLREQAEGYIRAVQWNLHYYYNGVQSWSWYYPHHYSPYISDIKNFSHLKFDFEPGKPFLP
FQQLLSIMPTASKELVPAAYRRLMTEDDSPLREYFPDDFETDLNGKTQEWEAVVLIKYIE
EDILLNSMKNFDHLLTETEKMRNKHGAHLEYEYTPKALESYPSPIPGHKWFPDIITSHAK
RTEFPSEEYRLEIHSLKKGRLPNTQNSFYFPGFPSLRFLPHRAELLLQGCTVFQQASRGY
NMILHLEDKPADVDTYAKLIGKEIHINYPHLKQAIVAKVCSDNTITTADGTKKMSEIEVK
DHARKLESLHSELKFRWGIHTGKAPKLILYCKPLIGRKYMYRGNDQVTIEKEWSDSEVPV
LHNTIVTDLLEHETEVKNFKTLDEVFIEKTPVFLMTLNEYGMQAAVKSILSEGYILVESE
FREEPDFMDIRKREPELRKNDFLPSFRLARELGLENHLVARLTGCVQVQLNSQEADTSQT
INIGLNLKFNKKNEEVVGFSKRIKTKDGRSEWRFSHATLSTLRDLLNTFGEFYAKLRDCF
EMDKIPLERCFSGDAYGPALNRVREVSKWIKERPCSKAPRQKSGGIVFDEGVVEAIQRHV
DKHNEAPTQLISVKAYASDIYLPGLHLGLFAPDPKAFFCMYDRIVNIRPDITIPMGLKGT
VIGIHKXESADDREATYEILFDEDFPTGNESRGARGKRVATLSSVSMINITHGARMNGSD
KYHQEVARKSQGAWGSQAETKMRILGKATPAPNKDNSRRKSEKHVPAKPAEEAKPVTLLT
RTQKDGTTQPKSKPQQADQKSEQQWFQPLPDTKGDRQPGKNSKKGETGRSPEKPAQTTPP
QRRPPQAKEINISVAELFNEIPGVRAEQGSRSSRQQVKHRQPQPEQAKPKVQQQRAQEPQ
QPQANPALGSSHTTRWRDPTSAKTKVISNILIIISNIVISISTKILRWSPAIRTILEDTI
IRNIKPVHLGPLIFQVGDLEDISTGDQAMPDMRMARHNKRTIVTLHISTIISSRGVLLAQ
AGRKAGSAPAQNDSKPGTESGKKDQKKRTPLVCEVAPIRGPMWKSEDDKSDAVEKRAATD
ARAADSTKKQADSQKPQPNPAKALPQQESNSAGATEGPAVRRRTGKYVKKETPPNLTVVN
TWSGGKTKKTKGVSCSGVRECSSLMSLDDRTPTPTSLAEKCAKAKAQASGTTAPSSALAR
GPVRSWPALQLADPMSKLSQQTILVMPSQATCADYANFEQLRREQLQPKMPQVETIYLNA
NMAQQLAASTMLTPPQSSSSQSLVSCSSSQLDPVTQEPIYQNDPKYHQFHGLGGSRVTLM
PFDHLGSSSSIFSRAEDEDRLLPLQPGVTLMHHRPSVGSSTASSSYYDEKNYVGSQQIQC
QTQNEKLYQNCDELPLPPGWSVDLTMRGRKYYIDHNTKTTHWNHPLEKEGLPTGWERIEN
PDFGVYYVNHISRLSQYEHPCLTHYGPMASQGALVPSPRGPPVHHEFHQHNVLVPPNPYL
TEEIPQWLLVYSRAPALHDHKIKWLLFKLPELECFQAILSRLYKEEVEEIVMSATATSTN
SASATSPSSATTNSASSSGATSAHQHLPPQQQQQQQISQQQHTEQQLVDQQQQPQQQQQQ
TTKPKPTASYSSTAVVSVQGNFPQQQSQQQQQQQHNNTHQQPSETTNTKL
NT seq
6273 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccaaaattctacagatggatatcggagagatacccttgtctttccacggtg
gcaagagaataccagctgcccgatttcgataatctctacctggacatgaatggtatcatt
catgtctgttcgcatccgaacgacgccgatgctcatttccgaatcactgaagccgaaatc
ttcaagaatattttcgattacatcgacttcatattcaggatggtcaagccgaagaaatac
ttcttcatggctgtggatggtgtagctccaagggctaagatgaaccaacagagagatcgc
cgatttcgctcagcgaaagaagcccatgaatccgagaaacaagcaaagcagaaaggcgaa
gagctcccgacggataagcgtttcgattcgaattgtatatcgcctggaaccgaatttatg
gagcgactccacgagcagctgaaatacttcgtcgtgatgaaattatcgacagacccagtc
tggcagcggcccaatttgaagattcatctcagtggtcatgacgctccgggggagggagaa
cacaaggccatggacttcatccgatatatcagatcccaagacgattatgatcccaacacg
cgtcactgcatttacggtcaggacgctgatctcatcatgcttgccttatgcacccatgag
ccccatatcgccttgctaagggaagaaattgtatacggaaaaaatacccaaaaacgagtt
caaagtgcggacaaagtcacgttccatttactccacgtgaatttgctccgggagtatctc
gaccacgaattttcggagttgaaagctccaggagttttgaaacagggttacaacttggag
aatatcatcgacgattggcttctgatgtgctttttagtcggtaatgacttcctccctcat
ctccccaaccttcacattgctcatgacgcgctcccgatcctgcacaaaacatattgttcc
gtcctccccactgtggatggctatctccatgagcaaggcaaactgaatctgaaaaacttc
gaagtcttcttgaaaaaactcggagaaagggacagggagatgttcgagcgtattgaggag
aagcacccagacggcatgaaaaagacggagaggaccgagatggaagcggcacgcaaaaag
tttcccggactcgatatacccgacgtagatagcgatgaagatatttgggaggaggaattc
cgccagcggaaacgacactactacatgtcgaagatgggctacgatgaagtcactgagagt
gttctccgagaacaagctgagggatatatccgggcggttcaatggaatcttcattactac
tacaacggagtccagagttggagctggtactatcctcaccattattcaccatacatatcg
gatataaagaacttcagtcatctgaagttcgacttcgagcccggtaagccgttcctgcct
ttccaacagctcctgtccatcatgccaacagcttccaaggagctggttcccgccgcgtac
aggcgtctgatgacggaagacgattctcccttgagagagtatttccctgacgatttcgag
acggatctcaatggaaagacacaagaatgggaggcagtcgtcctgatcaagtacattgag
gaagacattctactgaattcgatgaaaaactttgaccacctcctcacggagaccgaaaaa
atgcgtaacaagcatggagctcatctggagtacgagtacacaccgaaagctttagaatcc
tatccgtcgccgattccgggccacaaatggttcccggatatcatcacatcacatgcgaaa
cgaacggagttcccatccgaagagtataggctcgagattcattccttgaagaagggtcgc
ttgccgaacacccagaacagcttctatttccccggtttcccttctctacgttttctgccg
cacagagccgagctgcttctgcagggctgcacggtattccagcaggcttcgagaggctat
aacatgattttgcacctggaggacaaaccagccgatgtggacacgtacgcaaaactcatc
ggcaaggagatccacataaattatccgcatctcaaacaggctatcgtggcgaaagtttgc
tcggataacacgataacaaccgccgatggaacgaagaaaatgtccgagattgaagtcaag
gaccacgcccggaaactcgagtcgctccatagtgagttgaaattccgttggggaatccat
actggcaaggctccgaaattgattctctattgcaaacctctcatcggtcggaaatacatg
taccgcgggaacgatcaggtcacgattgagaaggagtggtcggatagtgaagtgcccgtc
ttgcacaacacgatagtcactgatctattggagcacgaaaccgaggtgaaaaacttcaaa
actttggatgaggttttcatcgaaaagaccccagtcttcttgatgactctcaatgaatac
gggatgcaggccgcagtgaagtcgattctttccgaaggctacattctcgtcgaaagcgaa
ttccgagaagaacctgactttatggacattcgcaaacgcgagcccgagttgcgcaaaaac
gacttccttccatcgttccgattagctcgggaactcggcttggaaaatcatttagttgcg
cgtctcaccggctgcgttcaggttcagttgaactcacaggaagccgatacaagtcaaacg
ataaacatcggtctcaacttgaaattcaataagaaaaatgaagaggttgttggtttctcg
aaacggattaaaacgaaggatggtcgtagcgaatggagattctctcacgcaactctgagc
actctacgagacctgctcaatacgtttggagaattctatgcgaagctccgggactgcttt
gaaatggacaagatcccattggaaagatgcttcagcggcgacgcttacggacccgctctg
aatagagtccgagaggtgtctaagtggatcaaggagcgaccttgttcgaaggcaccgcga
cagaaatcaggaggcatcgttttcgatgaaggcgtcgttgaggccatacagcggcatgtg
gacaagcacaatgaagctccgacccagttgatcagcgtcaaggcatacgcaagcgacata
tatctccctggattacatcttggacttttcgcgccggacccaaaagcgttcttctgtatg
tacgatagaatcgtaaacatcaggcccgatattaccatcccgatgggcttgaaaggaacc
gtgataggcatccacaagtaagaatccgcggacgaccgagaagccacctacgaaatactt
ttcgatgaggattttcccaccgggaacgagagccgcggagctcgtggcaagcgtgtcgct
actctgtcgagcgtgtcgatgatcaacattacgcatggcgcgcggatgaacggttcggac
aaataccatcaagaggttgcacgcaaaagccaaggagcgtggggctctcaagctgaaaca
aaaatgagaatccttgggaaagctacgccggcgccaaacaaggacaattcgcggagaaag
tcagagaagcacgtcccggcgaaacctgcggaggaagcaaagcccgtcacgctgttgacg
aggacccagaaggatggaacgacacagccgaagtcgaaaccgcagcaggccgaccagaag
agcgagcagcagtggttccagccgttacctgataccaaaggcgaccgccagcccggcaag
aatagcaagaagggagagacgggacgctccccggagaagcccgcccagacgacgcctcct
cagagaagacctccacaagcgaaggaaattaacatcagtgttgccgaacttttcaacgag
atcccaggtgtaagagcggagcaaggctcgaggagctcgcggcagcaagtaaaacaccgc
cagccgcagccggaacaagcaaagccgaaagtacagcaacagcgcgcgcaagaaccccag
cagccgcaagcaaacccggcgcttggctcctcgcacacaacccggtggagagacccgaca
tcagccaaaaccaaggtcatcagcaacatcctcatcatcatcagcaacatcgtcatctcc
atcagcaccaaaatcctaagatggtcccccgccatccgcacgatcctcgaggacaccatc
atccgaaacatcaagccggtccacctcggccccttgattttccaagtcggggacctcgag
gacatttccacgggagaccaagccatgccggatatgcgtatggcccgccacaacaaacgt
acaattgtcaccctccacatcagcaccataatcagcagccgaggcgttttgctcgcacaa
gccggcaggaaagccggatctgcacctgcgcaaaatgacagcaagcctgggaccgagtcg
ggcaaaaaggatcagaaaaagaggaccccgttggtgtgtgaggtcgcccccatacgtgga
ccgatgtggaaaagtgaggacgacaagtccgacgcagttgagaagcgtgctgcaacggat
gcgcgtgcagcagactccaccaagaagcaagcggattctcagaagcctcagcctaatcct
gcgaaggcgctacctcaacaagaatcgaactcggcaggagctactgagggacccgcggtc
cgaagacggactgggaaatacgttaagaaagaaacgccaccgaatctcaccgttgtaaat
acgtggtccggggggaaaaccaagaagaccaaaggagtcagctgctccggggtgcgggaa
tgttcgtcgttgatgtcactggacgatcgaactcccacacccacatcactcgctgaaaaa
tgtgccaaagcaaaagctcaggcgagcgggacgactgccccatcgagtgctttggcgcgg
ggtcctgtacggagctggcccgcgctccaactcgccgaccctatgagcaaactttctcag
caaacaattctcgtgatgccctcccaggcaacgtgcgcggactacgcgaatttcgaacaa
ttacgccgggagcaactgcaaccaaagatgccgcaagtcgaaacgatataccttaatgcg
aacatggctcaacaactggccgcatctacgatgctgacgccgccccaaagttcatctagt
caatccttggtgtcgtgttcgtcctcgcagctcgatccggtgacgcaggagcccatatac
caaaacgatcccaaatatcaccaattccatggactcggggggtccagagtgacgttgatg
ccgttcgatcatctcggctccagttcgagcattttctcgcgtgccgaggatgaggaccgt
ctgttgccgttgcaaccgggggtgactctcatgcatcatcggccgtcggtaggatcgtcc
actgcgtcatcctcctactacgacgagaagaactacgtcggttcccaacaaatccagtgt
caaacacagaatgagaaactctaccaaaactgcgatgagctcccgctaccgccgggctgg
tcagtcgacttgacgatgcgtggacgtaaatactacatcgatcacaacaccaaaaccact
cattggaaccatccattagaaaaggaaggcttgccgacgggttgggaacgcatagaaaat
ccagatttcggagtatactacgtgaatcacataagtcgcctgtcgcaatatgagcatcca
tgtctgacgcattatggccccatggcatcccagggtgcgctggtaccttctcccagagga
ccgccagtgcatcacgagttccatcaacataatgttcttgtgccaccgaatccgtacctg
acggaagagataccgcaatggttgctggtttactcccgagcacccgcgctgcacgaccac
aagatcaaatggttgttatttaagttacctgagttggaatgtttccaagcgattttgagt
cggctatacaaggaagaggttgaggagatcgtcatgagcgcaacagcaacatcaaccaat
tcagcaagcgcaacaagcccatcaagcgccaccacaaactctgcaagtagttcaggtgca
acaagcgcacaccagcacctgccaccgcagcagcagcagcaacagcagatatcgcaacag
cagcatacggagcaacaacttgtggatcaacaacagcagccgcagcagcagcagcagcaa
accacgaagccgaagcccacagcttcgtattcgagcaccgcagtggtgtctgtacaaggc
aatttccctcagcaacaatcgcaacagcaacaacaacagcagcacaacaatactcatcaa
cagccgagcgaaactaccaatacgaagctttag
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integrated database retrieval system
