Galendromus occidentalis (western predatory mite): 100908147
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Entry
100908147 CDS
T11057
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
goe
Galendromus occidentalis (western predatory mite)
Pathway
goe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
goe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100908147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
goe03041
]
100908147
Enzymes [BR:
goe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100908147
Spliceosome [BR:
goe03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
100908147
Complex B
100908147
Complex C
U2 SnRNP specific factors
100908147
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100908147
NCBI-ProteinID:
XP_003748366
UniProt:
A0AAJ6QYV3
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MMSGRGRRYDDEGNYSSYGRSSGSSGSSRDFRAVAPPVQVSRAAPTTKGYTKQTQIQQTM
DQMPSYDQLINKPRTEEDYWNEDEDETPQKQARDDDSDDEEDPLDAFMADLSKDMKKQDK
PKDTTKTSKRGIRDDIEAEDDEESYYKFMKENPLAGTAADEDDLDLEYDEDGNPIAPLKS
KWIDPLPAIDHSLIQYQPFEKNFYDEHPEISNLTADEVQKLRTTLGIKVIGAMASKPVVS
FAHMNLDANLMKAVRKALYETPTPIQAQAIPLALNGRDLIGIAKTGSGKTLAFLIPILVH
IMDQAELKVGEGPIGLILAPTRELAMQIYTEAKKFAKVYNVNVACCFGGGSKWEQSKALA
EGAEIVVATPGRMIDMIKMKATNLERVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQC
LMFSATFKKRIEKLARDVLSDPVKIIQGDVGEATEDVTQMMIFIKDKELKDIENKKFLWL
AENLVGFCSQGSVLIFVTKKASCEIVAEKLKQRDHKLGMLHGDIDQSERTKLIAAFKRQD
FPILVATDVCARGLDISHIRTVINFDTARDIDTHTHRVGRTGRAGQKGLAYTLFSEKDKE
FAGHLVRNLEGANQKVPKDLMDLAMQSQWFRKSRFKQGKGKHLEMKSKERPGLGCSSQGS
SSNQPQQPSLSESFAAQQTSGDMKPVNRLAVMKAAYGAQFRTQFRAASDSTNSSAGSHFQ
QPTPPPPPPASSEMPGTDENKKKKSRWA
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggcagaggccggagatacgatgatgaagggaattactcgtcgtacggtaga
tcctctgggagttccggcagctcgcgagactttagagcggtcgcgcctccggtgcaagtg
tccagagcggctccaacgactaaaggttacacaaagcagactcaaatccaacagacaatg
gatcaaatgccgagttacgatcaactcatcaataagcctcgaaccgaagaagactactgg
aatgaggacgaggatgaaacacctcaaaagcaggcgagggacgacgactctgatgacgaa
gaagatccgttagacgccttcatggctgatcttagcaaagacatgaaaaagcaggataaa
ccgaaggacaccacaaaaacgtctaagaggggaatccgggacgatatagaagccgaggac
gatgaggagagttattacaaattcatgaaggagaatcccttagctggtaccgctgctgat
gaggatgatctggacctagaatacgacgaggacggaaatccgatcgcgccgctcaagagc
aaatggatcgatccgttgcctgccatagatcactcattaattcaatatcagccgttcgag
aagaacttttatgacgaacacccagaaatttcgaacctaacggcggatgaggtccaaaag
ctccgaacgacgctcgggatcaaagtcatcggagccatggcctcaaaacccgtagtttcg
ttcgctcacatgaacctggacgcgaacctcatgaaagctgtccgcaaagccctctatgaa
acgcctactccgatccaagcacaagcgattcccctagcgctcaatggaagagatctcatc
ggaatcgccaagaccggatccggaaaaactcttgcattcctgatccccatacttgtacac
atcatggatcaggcagagctgaaagtcggtgaaggtccgatcgggttgatcctagctccg
acccgagaactcgcgatgcaaatctacactgaagcgaagaaattcgccaaggtctataat
gtaaatgttgcgtgctgtttcggtggaggatcgaaatgggaacagtcaaaagcgttggct
gagggagccgaaatcgtcgtagccactcctggccgtatgatcgatatgatcaaaatgaaa
gccacaaatctcgagagagtgacgttcctcgtcttggacgaagcggacaggatgttcgat
atgggattcgaacctcaggtgaggtcgatctgcaatcacgtgagaccggacagacaatgt
ctcatgttcagtgccacattcaagaaaagaatcgagaagctggcgcgagacgtgctctcg
gacccagtcaagatcatccagggcgacgtgggtgaagccaccgaggacgtcacgcaaatg
atgattttcatcaaagacaaagagttgaaggacattgagaacaagaaattcctctggctg
gccgagaatctcgtcggtttctgcagtcaaggaagcgtactgatcttcgtcaccaagaaa
gcgagctgcgaaatcgttgccgagaaactgaaacaaagggatcataaactgggtatgctg
cacggcgacatcgatcagagcgagcgaacgaagctgatcgctgcgttcaaacgtcaagat
ttcccgattctcgtcgcaactgatgtctgtgcgagaggtttagacataagtcacataagg
acggtgataaacttcgatacggctcgggacatagatactcatactcatcgcgtcggaagg
acgggccgtgctggacagaagggtttggcgtatacgctattctctgaaaaggataaggag
ttcgcagggcacctcgtgaggaatctcgagggcgccaaccagaaggttcccaaagatctc
atggatctcgctatgcagagccagtggttcagaaagtcgcgcttcaagcagggcaaaggc
aaacacctcgaaatgaaatcaaaggagagaccgggattaggatgctcatcccaaggaagc
tcctccaaccagccccagcaaccatcgctgagcgaaagtttcgcggctcagcaaacctcc
ggtgacatgaagccggtgaacagattggctgtcatgaaagcggcttacggagcacaattc
cgaacgcagttccgagcagcttcggactcgacgaacagctcagcaggatcgcatttccag
cagccgacgcctcctccaccaccacctgcttccagcgaaatgccagggacagacgaaaac
aaaaagaagaagtcgagatgggcttga
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integrated database retrieval system
