Galendromus occidentalis (western predatory mite): 100908229
Help
Entry
100908229 CDS
T11057
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
goe Galendromus occidentalis (western predatory mite)
Pathway
goe03440
Homologous recombination
goe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
goe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100908229
03450 Non-homologous end-joining
100908229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
goe03032
]
100908229
03400 DNA repair and recombination proteins [BR:
goe03400
]
100908229
DNA replication proteins [BR:
goe03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
100908229
DNA repair and recombination proteins [BR:
goe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
100908229
BRCA1-C complex
100908229
NHEJ (non-homologous end-joining)
MRX complex
100908229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_21
AAA_15
SbcC_Walker_B
ABC_tran
Rad50_zn_hook
AAA_29
SlyX
AAA_16
AAA_13
AAA_22
Motif
Other DBs
NCBI-GeneID:
100908229
NCBI-ProteinID:
XP_003744480
UniProt:
A0AAJ6QUP5
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKLTIRGVRSFGPEESDTQRISFTPPLTLILGHNGAGKSTIIECLRMMTTNDMPPG
QGQCFIHDPSLTGRNTTHAKVELRLTDAKDRQFDISKIFTLTKKDKTYKFSTTDTNILNK
ETDENLSSKCIDVNAFMSQALGVPKAVIQNVIFCHHSESDWPLGEGKALKERFDAIFSAT
KYVEVLEVLNKERKEIKGRISTSEALKKPVSEKVATYRNELKEIGCKKEKLVARKKDLIR
IRDEVERVFGERNEAERKYQELALIEQEYRRHADEYSSCKKRLQELKAGVTEVMDRPRDE
LEEELENFDSKMLKRKEKVELNKERIKKMKAATEKKRNEVQDKERAFVRLESEFKQHQQN
ISKLIASLKSLDRSLEAGADISLSDYRDKKVSDHVKMFDGKIKEMEQSLGSKRQRFSSEL
ESLQKEIQKQTELKASLKTQLDSLAAKKDGVVMDLSDREDELKEVACIGNKLEKFDRDIK
EMEDKLRTLKQLTEEGDMDELSDKIEELAKRENTLNAELSNATKSSAIKNKIKSLEDQIG
KKANGVNNLKVRITRELKEPLAKLELELPQKEWARATRSASSDLEAGIKVLRKSIELKNK
EVTKSQTELDMNEKEMSKLQKKLKELRNKIDDEIGFESTLDETLRETEETVNEARNRDSI
FIGTQHVYSKYKKKIADQRRSRVEQCCPLCDTSMEEDAVRKLEQKLEKLMMELPKIRKDS
EKEVVEVSAKLSRLNLLKRDDQEREKIENDLLPDLESKAKSLRSELQTLRDDLSSLKTDL
ESKIEIAGVLNRLAGSCDLYDSGVRDLESLRNDLKKEKNSLEDDCRDVDDVMRDMNEVKQ
KKRTLDESYKQKQNRLQEVSDVQVKLGQARNEKLQLLNKAGAEAQIKQAISKLNKELAQI
EEEIPTIEKKLRTANSTLEESESSRQRLARQQEKQIDELQARISKTKQEREEVGKMLRTL
EEFEQSDKESKMSAATDEITSLKTEFRRVRDECEEMEETTRQMELEVGSEATRRRELSDN
IAIIVKTLELEELKQNVDKHKEKLAEHKSGDGDHIDILNRIRDRHEKLKAEELTTASEVH
NDEKHIMEREGIVRKQFESAEKEYKEWLTNSLTEKQISRDLDVGYTALNKAILAFHQEKM
NLINRIIREYWVRVYKGNDIDQIQIEFNEDTGASKTSTKRSYQYRVVMVRQGVKQDMRAR
CSAGQRVLACIIVRLALAEAFCDGCAMLALDEPTTNLDFDNMKSLAEILADIVRNRKTEK
NFQMVVITHDETFILALSKHLEDIGEVKHYFEVKKNDDNMSVISKKRLDVDY
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgaatcgagaagctgactataagaggtgtcagaagttttgggccggaggaatcc
gatacacagcgcatatcattcactcctccgctcacattaattctggggcataatggagcc
gggaagtcgacaatcatcgaatgtctccggatgatgacgacgaacgatatgccccccggt
caaggccaatgtttcatacacgacccctcgcttacgggtcgtaacaccacgcacgcgaag
gtggagctccggttgacggatgccaaggacagacagttcgatatttcaaagatcttcact
ctcacgaagaaggacaagacgtataaattctcgaccaccgataccaacattctcaacaaa
gaaaccgatgagaacctcagctcgaagtgcatcgatgtgaatgcattcatgtcccaggcc
ctgggggttccgaaggctgttattcaaaacgtgatcttctgccatcattcagaatcggac
tggccactaggtgaaggcaaagctctgaaggaacgcttcgatgctatattttcggccacg
aaatacgtcgaggtactcgaagttctcaacaaagagagaaaggagatcaagggtcgcatc
tcaacgtctgaagctctgaagaaaccagtctccgaaaaagtcgcaacctacagaaatgaa
ctcaaagagattggctgcaaaaaagagaagctcgtggcaaggaagaaagatttgatcagg
atccgcgacgaagtggagcgggttttcggagaacgcaacgaggctgaacggaagtatcag
gaactcgctctgatcgagcaggaataccgcagacatgcggatgagtacagctcttgtaag
aagcggttgcaagagctcaaagccggcgttacggaggtcatggatcgacctcgtgatgag
ctcgaagaggagctcgagaattttgactctaaaatgctcaaacggaaagagaaggtcgag
cttaataaggaaagaatcaaaaagatgaaagccgctaccgagaagaaaaggaacgaggtt
caggacaaagaacgcgctttcgtgcgactcgaaagcgagttcaaacaacaccaacagaat
atttcgaagctcatcgctagtctcaagagtcttgatcgatcactggaggccggagctgat
atatctctcagtgactatcgtgataaaaaagtcagcgaccacgtcaaaatgttcgacggg
aaaatcaaggagatggaacaaagtctcggcagcaaacgtcagcgattttcttcggagctc
gagtctttacagaaggaaattcagaagcagaccgagctcaaggcatcgctgaagacccaa
ctggattccctcgctgccaagaaagatggggtagtcatggacctatccgacagagaggac
gagcttaaagaagtcgcgtgcattggaaacaaactcgagaagtttgaccgagacatcaaa
gaaatggaggataaattgcgaacgctgaaacagctgaccgaagaaggcgacatggacgag
ctttccgacaagatagaagagctggccaagagggagaatactttgaacgcagaactcagc
aatgccacgaagagcagcgccataaagaacaaaatcaagtccttggaggatcagatcggc
aagaaggccaacggagtcaacaatttgaaagtcagaatcacgagagaactcaaggagcct
ttggcgaaactcgaattggagctcccccaaaaagaatgggcgcgagccactcggagcgcg
agctctgatctcgaagcaggcatcaaggttttgcggaagagcatcgaattgaaaaacaaa
gaggttaccaagtctcaaaccgagttggacatgaacgagaaggagatgagcaagctccag
aaaaaattgaaagagctccgcaacaagatcgacgatgagattggattcgagagcaccctc
gacgagacactgcgcgagaccgaggagacggtgaacgaggcgcgaaatcgcgatagtatt
ttcatcggaacgcaacacgtgtacagcaaatacaaaaagaagatcgcggaccagagacgc
tctcgagttgaacaatgctgcccgctctgtgatacgtccatggaagaagacgccgttcgg
aagctcgagcaaaagctcgagaaacttatgatggaacttccgaagatccggaaggactct
gaaaaagaggtcgtggaggtcagcgcgaagttgagcagactcaatctactcaagcgagac
gaccaggaacgagagaaaatcgagaacgacctcctccccgatctcgaatcgaaggcgaag
tctttgaggagcgaactccaaacactccgggatgatctgtcgtcgctcaaaacagacctg
gagtcgaagatagaaatcgccggggttctgaaccgcttagccggttcctgcgacctctat
gacagcggagtgcgcgatctggagagcctccgaaacgatcttaagaaagagaagaactcc
ctcgaagatgattgtcgcgacgtggacgacgtaatgcgagacatgaacgaagtcaaacag
aagaagagaactttggatgagagttacaaacaaaaacagaatcggcttcaagaagtttca
gacgttcaggtcaaactgggtcaagcgaggaacgagaagctacagctattaaacaaggcg
ggagccgaggcccaaatcaagcaggcgatcagtaaactcaacaaagagttagctcagatc
gaagaagagatcccgactatcgagaagaaattgcggaccgcgaactcgacactcgaggag
tccgagagctcgagacaaaggctggcgcggcagcaggagaaacaaatcgatgagctgcag
gcgaggatttcaaagacgaaacaagaacgggaggaagtcggaaaaatgttgcgaactctc
gaagaatttgagcaatccgacaaggagagcaaaatgagcgcagccacagatgagatcact
tccctcaaaactgaattccgtcgcgtcagggatgagtgcgaggaaatggaggagaccact
cgtcaaatggagctcgaggtcggctccgaagccaccaggagacgagaactttccgacaac
atcgcaataatcgttaaaaccctcgaactcgaagagctcaaacagaacgtcgataaacat
aaagagaaattggccgagcataagtcaggagacggagatcatatcgacattctgaatcgc
atccgcgaccgtcacgagaaactgaaagccgaggagctgacgacggcgtctgaagttcac
aacgacgagaaacacataatggagcgagaagggatcgtgcggaagcaattcgagagcgcc
gaaaaagaatacaaggaatggctgacgaactcgcttaccgagaagcaaatatcccgagat
ctcgacgtcggatacacggcactgaacaaagctatcctggctttccatcaagagaaaatg
aatttgatcaacaggataatcagagaatattgggtgcgagtctacaagggcaacgacata
gaccaaatccagatcgagttcaatgaagacacgggggcgtcgaagacgtccaccaagcgg
agctatcagtatagggtagtcatggtcaggcagggagtgaaacaagatatgagggcaaga
tgctccgctggtcaaagagttctcgcgtgtatcatcgtccgtttggcgctggcggaggct
ttttgtgacggatgtgcgatgttggctttggatgagccgaccacgaacctcgatttcgac
aacatgaaaagtttggcggaaattctcgctgatatcgtccgcaaccgtaagaccgagaag
aattttcaaatggtggtcataacccacgacgagactttcattctcgcgctctctaagcat
ctcgaggacattggagaagtcaaacattacttcgaagtgaagaaaaacgacgacaacatg
tctgtgatctccaagaagcgtctcgacgtcgattactga
DBGET
integrated database retrieval system
