Gemmata obscuriglobus: C1280_00330
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Entry
C1280_00330 CDS
T05475
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gog
Gemmata obscuriglobus
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gog03016
]
C1280_00330
Enzymes [BR:
gog01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
C1280_00330
Transfer RNA biogenesis [BR:
gog03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C1280_00330
Prokaryotic type
C1280_00330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AWM42085
UniProt:
A0A2Z3HGI8
LinkDB
All DBs
Position
91896..92954
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AA seq
352 aa
AA seq
DB search
MSPPLFTADLPGVGGRIRARDEDFEVEEVPSYEPSGSGDHLYLWVEKKGVAPEFFAQTIA
RKLGTHPGNVGTAGLKDRHAVTRQWVSVPRECEPRVGKLDGDGVRVLKTGLHANKLKPGH
LRGNKFTILIRDADRSAPADAILDRIRTQGLPNYYGPQRFGRDGGTVDLGFQCLAGKAPR
RIRPFLFRFALSAVQSLLFNDYLSRRMKDGLFRTVLDGDVMTKWPFGGMFVAQDVPAEQA
RFDARETVTAGPMFGKKTFPGAGVAAEREAVVLSDNKLSVASFAGFGKLVMGTRRQNIVY
LDDLTSAWEADGLRLSFTLPAGSYATVLLAEVMKANIAEDGDASDGADEDEQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccccgctgttcaccgccgacctgccgggggtcggcgggcgcatccgcgcccgc
gacgaagacttcgaggtcgaagaggtgccctcctacgagccgagcggctcgggcgaccac
ctgtacctctgggtcgaaaagaagggcgtcgcgccggagttcttcgcccagactattgcg
cgcaagctgggcacgcaccccgggaacgtcggcaccgcgggcctcaaggaccgccacgcg
gtcacccggcagtgggtgtccgtgccgcgcgagtgcgagccccgcgtcggcaaactcgac
ggcgacggcgtgcgggtgctgaaaacagggctgcacgcgaacaagctgaagcccggtcac
ctgcgcggcaacaagttcaccattctgatccgcgacgccgatcgctccgcgcccgcggac
gcgatcctggaccgcatccgcacccaggggctgccgaactactacggcccccagcggttc
ggccgcgacggcggcaccgtggacctcggcttccagtgcctcgcgggcaaggcgccgcgc
cgcatccgtccgtttctcttccggttcgcgctctcggcggttcagtcgctgctgttcaac
gactacctctcgcgccggatgaaggacgggctgttccgcaccgtactcgacggcgacgtg
atgacgaagtggccgttcggcgggatgttcgtcgcgcaggacgtgcccgcggagcaggcg
cggttcgacgcgcgcgaaacggtgacggccgggccgatgttcgggaagaaaacgttcccg
ggggccggtgtggcggcggaacgcgaggccgtcgtgctgagcgacaacaagctctcggtg
gcgtcgttcgccgggttcggcaaactggtgatgggcacccggcgccagaacatcgtctac
ctcgacgacctcacctccgcgtgggaggcggacgggttgcggctgtcgttcacgctcccg
gcgggcagctacgcgacggtgctgctcgcggaggtgatgaaggccaacatcgcggaagac
ggcgacgcatcggacggtgcagacgaggacgaacagtag
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