Gemmata obscuriglobus: C1280_03245
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Entry
C1280_03245 CDS
T05475
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gog
Gemmata obscuriglobus
Pathway
gog03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1280_03245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gog03400
]
C1280_03245
Enzymes [BR:
gog01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C1280_03245
DNA repair and recombination proteins [BR:
gog03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C1280_03245
Prokaryotic type
C1280_03245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
AWM36115
UniProt:
A0A2Z3GZ34
LinkDB
All DBs
Position
749953..750768
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AA seq
271 aa
AA seq
DB search
MGKKKKPVETSSLFDEDQPKPPAPELAPQPVAEELPPLPPGVPGLPADLDPSWHKALDPE
TRKPYWADLVRFIVEERKTQTVFPPAPDVFNAFRFTPLDKVKVLILGQDPYHGPGQAHGL
CFSVRPGIATPPSLRNIYKELESDLGIPPVKHGYLAEWARRGVLMLNACMTVRKGQANSH
KDKGWEKFTDAAISAVSAQPRRVVFVLWGSYAQKKIPLIDQKKHVVVKSAHPSPFSEHLF
FGTKPFSKVNEVLEAAGEEPIDWRLPEKAEE
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaagaagaaacccgttgagacttcgtccctgttcgatgaagaccagccgaag
ccgcccgcaccagaactggccccccaacctgtggccgaagagttgcccccgctcccgccc
ggcgtgccgggactccccgccgacctcgacccgtcctggcacaaggccctcgatcccgaa
acgcggaagccgtactgggccgatctcgttcggttcatcgtcgaagagcgcaaaacgcag
accgtgtttcccccggcaccggacgtgttcaacgcgttccggttcaccccgctcgacaag
gtgaaggttctgatcctcggacaggatccgtaccacggcccggggcaggcgcacggactg
tgcttctcggtccggcccgggatcgcgacaccgccgtcgctccgcaacatctacaaggaa
ctcgaaagcgacctcggcatcccgccggtcaagcacggctacctggccgagtgggcgcgg
cgcggcgttctgatgctcaacgcctgcatgaccgtgcggaagggacaggccaactcgcac
aaggacaaggggtgggagaagttcaccgacgccgcgatttcggccgtgagcgcccagccc
cgccgggtggtgttcgtgctgtggggctcgtacgcgcagaagaagatcccgctcatcgac
cagaagaagcacgtggtggtgaagtcggcgcacccctcgccgttctcggagcacctgttc
ttcgggaccaagccgttttcgaaggtcaatgaggtgctcgaggccgcgggtgaggaaccg
atcgactggcgactgccggaaaaggcagaggagtaa
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