Gemmata obscuriglobus: C1280_03425
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Entry
C1280_03425 CDS
T05475
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
gog
Gemmata obscuriglobus
Pathway
gog03030
DNA replication
gog03430
Mismatch repair
gog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1280_03425 (holA)
03430 Mismatch repair
C1280_03425 (holA)
03440 Homologous recombination
C1280_03425 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gog03032
]
C1280_03425 (holA)
03400 DNA repair and recombination proteins [BR:
gog03400
]
C1280_03425 (holA)
Enzymes [BR:
gog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1280_03425 (holA)
DNA replication proteins [BR:
gog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C1280_03425 (holA)
DNA repair and recombination proteins [BR:
gog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C1280_03425 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
AWM36149
UniProt:
A0A2Z3GPE4
LinkDB
All DBs
Position
796622..797641
Genome browser
AA seq
339 aa
AA seq
DB search
MDALQFLSAKDAKRHPVYALVGDEDFLKRHARERIISIAIGDEDPSFAVSASGGDRLDFS
TARNELETLPFLAPCRVLIVDAADKFVTENRQALEAYAAKPSAVGVLVLDVKTFPENTKL
AKALPDGAKIVCKAPPEYKIGAWCVEWAKTAHKKKLATEAAELLVERVGTSMGLLDQELG
KLANAVGAKPVISADDVDTLVGRSKAADVFRIMDAIGDGKPAQALSILQELFAEGEDPMA
VIGPLTAQLRKLATVGRLMVVEKLPMGSAMDAANVPKWEKARVNCEKQLKHLGGPRLLKL
PDWLVEINYGLKGGNPLPERVQVERLIVMLARPREDVKK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggacgcactgcaatttctctcggcgaaggacgcgaaacgacacccggtgtacgcgctc
gtcggtgacgaggactttctcaagcgccacgcccgcgagcgcatcatctcgatcgccatc
ggtgacgaagacccctcgttcgcggtcagtgcgtccggcggggatcggctcgacttctcc
accgcccgtaacgaactggaaacgcttccgtttctggccccgtgtcgcgtgctgatcgtg
gacgcggccgacaagttcgtcaccgagaaccgtcaggcgctcgaagcctacgccgcgaag
cccagtgccgtcggagtgctggtgctcgacgtgaagacgtttcccgaaaacacgaagctc
gccaaagcgctgcccgacggggccaagatcgtctgcaaggcgccgccggagtacaagatc
ggcgcttggtgtgtggagtgggccaaaaccgcgcacaagaagaagctcgcgaccgaggcc
gccgaattgctcgtcgagcgggtcggcacttcaatgggtttgctcgatcaagaactcggc
aaactcgcgaacgcggtcggcgcgaagcctgtcatctcggccgacgacgtggacacgctg
gtcgggcgaagcaaggccgcggacgtgttccgcatcatggacgcgatcggggatggcaag
ccggcgcaggcgctcagcatccttcaagagctgttcgcggagggcgaagacccgatggcc
gtgatcggcccgctcaccgcgcaactgcggaagctcgcgaccgtcgggcggctgatggtc
gtggaaaaactcccgatggggtcggcgatggacgccgccaacgtgcccaagtgggagaag
gcacgggtgaactgtgagaagcaactgaagcacctcggcggccctcggttgctcaaactc
ccggactggctggtggagatcaactacgggctcaagggcgggaacccgttacccgaacgg
gtgcaagtggaacgactcatcgtgatgctcgcccgcccgcgcgaagacgtgaagaaataa
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