Gemmata obscuriglobus: C1280_06590
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Entry
C1280_06590 CDS
T05475
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gog
Gemmata obscuriglobus
Pathway
gog03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1280_06590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gog03400
]
C1280_06590
Enzymes [BR:
gog01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C1280_06590
DNA repair and recombination proteins [BR:
gog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C1280_06590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AWM36721
UniProt:
A0A2Z3GVZ0
LinkDB
All DBs
Position
complement(1649058..1650398)
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AA seq
446 aa
AA seq
DB search
MIVAAPDFAAWRAAARALLVAAVPPADVLFDDGTAPGLFAAGELPPAPTAAAPEVPRAFV
ALAEAVACHREAQRWDRLYRVLWRLTRGEPHLLALATDDEVSWLLRAEKSVRRDVHKMHA
FVRFRAVGGHFVAWHRPDHRIVRRAAPFFRRRFPEMRWSILTPDESVTWDGVGLHFGPGV
PAGAAPPPDVLEDMWKTYYRATFNPARIKLTAMKKELPVRHWATLPEAAIIPDLLSEAGD
RVAAMVAHAEGAGSAAAFMPAARDLDSLRAAARSCTACGRCGPGAPPAFGVGPGGARVVL
VGDHPRASGAADDLLAGALAEAGFDPAAVYRTHAVKRAPRPSPAAPREPHRGAGACRPWL
TAELAALAPAVVVCLGPHAARAVLGPLFRFAERRGEPVAAGPVARAIATHHPSAVLRDPA
GTGSEMGAELVRHLALARRLAARGPE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgccgcccccgacttcgccgcgtggcgtgccgccgcccgcgcgctgctcgtc
gccgccgtgcccccggccgacgtcctcttcgacgacggcaccgcgccgggcctgttcgcc
gcgggcgaactgccgcccgcgcccaccgctgccgcgcccgaggtgccgcgggcgttcgtc
gcgctcgcggaggcggtcgcctgtcaccgcgaggcgcagcggtgggaccggctctaccgg
gtgctgtggcggctgacccgcggcgagccgcacctgctcgccctggccaccgacgacgag
gtgagctggctgctgcgggcggagaagtcggtgcgccgcgacgtccacaagatgcacgcg
ttcgtccggttccgcgcggtgggcgggcacttcgtcgcgtggcaccggccggatcaccgg
atcgtgcggcgggccgccccgttcttccgccgccggttccccgagatgcgctggtcgatc
ttgacccccgacgagtcggtgacgtgggacggcgtggggttgcacttcggccccggcgtg
ccggcgggcgccgcgcccccgccggacgtgctcgaagacatgtggaagacgtactaccgg
gccacgttcaacccggcccggatcaagctgacggcgatgaagaaggagctgccggtgcgg
cactgggcgacgctgccggaagccgccatcatccccgacctcttgtccgaagccggtgac
cgcgtcgcggcgatggtggcgcacgccgagggggccggctcggcggcggccttcatgccc
gcggcccgcgacctcgacagcctgcgcgccgcggcgcgtagctgcaccgcgtgcgggcgg
tgcgggccgggcgcgccgccggcgttcggcgtcggcccgggcggcgcgcgggtggtactg
gtcggcgaccacccgcgcgcgagcggagcggccgacgacctgctcgccggggcgctggcc
gaggcggggttcgacccggccgcggtgtaccggacccacgcggtcaagcgggcgccgcgt
ccgtcgccggccgccccgcgcgagccgcaccggggggccggcgcgtgccggccgtggctg
accgccgaactggcggcgctcgccccggccgtggtcgtgtgcctcggcccgcacgcggcg
cgggcggtgctcggcccgctgttccggttcgccgagcgccgcggcgagccggtggctgcg
ggaccggtggcgcgcgcaattgcgacccaccacccgtcggccgtgctccgcgacccggcg
ggaacgggttccgagatgggggcggagctggttcggcacttggccctggcccgccggctc
gcggcgcgcgggcccgagtag
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integrated database retrieval system
