Gemmata obscuriglobus: C1280_07130
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Entry
C1280_07130 CDS
T05475
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gog
Gemmata obscuriglobus
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gog03032
]
C1280_07130
03400 DNA repair and recombination proteins [BR:
gog03400
]
C1280_07130
Enzymes [BR:
gog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C1280_07130
DNA replication proteins [BR:
gog03032
]
Prokaryotic type
DNA Topoisomerases
C1280_07130
DNA repair and recombination proteins [BR:
gog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C1280_07130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AWM36811
UniProt:
A0A2Z3GW60
LinkDB
All DBs
Position
1786890..1787954
Genome browser
AA seq
354 aa
AA seq
DB search
MTRAAVTIRVKRTVTTRVTVETVFKFAARVSHSSDDRPGIRRERVRGGFRYRAPSGELIC
DTATLARIRSLAIPPAWEQVWICASPRGHVQATGRDARGRKQYRYHPAFRSSREGDKFGR
VAAFGATLPKIRKRIEADLRRPGLPKQKVLAAVVKLLDHTHLRVGNAEYVKANKSFGLST
LCDRHVSFTSGSVRVQFRGKSGVRHERKVSDKRLARVVRSCRDLPGQHLFQYRTPDNEVR
KIGSADVNAYIRAAAGGAFTAKDFRTWAGTVVALQLARDLPAPESRTAAEKAFVGVIEGV
AAVLGNTPAVCRKSYVHPRVLEEFAAGALLHSRQRSGLSPAESGLLHLLTSDRS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgactcgggccgccgtaacgattcgtgtgaagcgcaccgtcacgacacgcgtgacggtc
gaaaccgtgttcaagttcgcggcccgggtgtcgcactcgtccgacgatcggcccggtatc
cgccgcgagcgcgtccgtggcgggttccgttaccgcgcaccgagcggggaactcatttgt
gacaccgcgacgctcgcacgcatccggtcgctcgcgatccccccggcgtgggagcaggtg
tggatttgcgccagtccgcgcgggcacgtccaggccacagggcgcgacgcccgcgggcgc
aagcagtaccgctaccaccccgcgttccggtcctcgcgcgagggggacaagttcggccgg
gtcgcggcgttcggggcgacgctgcccaagatccgaaaacgaattgaagccgacctgcgg
cggcccgggctcccaaaacaaaaggtgcttgcggcggttgtgaagttgctggaccacacg
cacctgcgggtcggcaacgccgagtacgtaaaggcgaacaaatcgttcgggctgagcacg
ttgtgcgaccggcacgtttcattcacgagcggttcggtgcgcgtgcagttccgcggcaag
agcggcgtgcggcacgagcgcaaggtgagcgacaagcggctggcccgggtggtccgctcg
tgccgcgacttacccggccaacacctctttcagtaccgcaccccggacaacgaggtgcgc
aagatcggctccgcggacgtgaacgcgtacatccgcgccgcggccgggggcgcgttcacc
gcaaaggacttccgcacctgggcgggcacggtcgtcgcgctccaactggcaagggatctg
ccggcgccggaatcgcgaaccgccgccgaaaaggcgttcgtgggcgttatcgaaggcgtg
gccgcggtgctgggtaacacgcccgcggtgtgccgtaagagttacgtccacccgcgcgta
ctggaggagtttgccgccggcgcgctcctgcactcgcggcagcggtccgggctgtcgccc
gcggagagcgggctgctccacttgttgaccagcgatcggagctga
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