KEGG   Gemmata obscuriglobus: C1280_09695
Entry
C1280_09695       CDS       T05475                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K02405  RNA polymerase sigma factor FliA
Organism
gog  Gemmata obscuriglobus
Pathway
gog02020  Two-component system
gog02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:gog00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C1280_09695
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    C1280_09695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gog03021]
    C1280_09695
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:gog02035]
    C1280_09695
Transcription machinery [BR:gog03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     C1280_09695
Bacterial motility proteins [BR:gog02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    C1280_09695
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 HTH_23 PhyR_sigma-like UPF0122 MarR_2 HTH_IclR MarR HTH_28 CYNS_N Rv2175c_wHTH HTH_15 Clr5 Sigma70_ECF HTH_38 UPF0175 TnsD
Other DBs
NCBI-ProteinID: AWM37271
UniProt: A0A2Z3GX94
LinkDB
Position
complement(2389975..2390718)
AA seq 247 aa
MSGNLNTGNIQAYQRQAEQQRRDELIVSHLPLVKHVIGRLIGDVPPGVDVENLESAGVLG
LVEAAAKFDPARNAQFKTFAYLRIRGAIVDEMRRNSPLPQHVHARLALVRRACRTLPHPI
TVEAIAAATGLSEDEVTDTLSAERMAKTMSWEQASESTGLEPAGGGEEPGAEMERWESVQ
QLGDAIQELEPKERIAVTLYYKEDLRLKEIAEVMKLSVSRVSRLLSKATFELGERLKVHR
NGVLSHG
NT seq 744 nt   +upstreamnt  +downstreamnt
atgagcggcaacctgaacaccggcaacatccaggcgtaccagcggcaggcggagcagcag
cggcgcgacgagctgatcgtgtcgcacctgcccctggtgaagcacgtcatcgggcgcctc
atcggcgacgtgcccccgggcgtggacgtggagaacctggagtcggccggggtgctcggg
ttggtcgaggcggcggccaagttcgaccccgcgcggaacgcccagttcaagacgttcgcg
tacctccgcatccgcggcgcgatcgtggacgagatgcggcgcaacagcccgctgccgcag
cacgttcacgcccggctcgcgctggtccgccgcgcgtgccgcaccctgccccacccgatc
acggtggaggccatcgccgccgccaccgggctgtccgaggacgaagtgaccgacacgctc
tcggccgagcgcatggcgaagaccatgtcgtgggagcaggcgtccgaatcgaccggcctg
gagccggccggcggcggcgaggagcccggcgccgaaatggagcgctgggagtcggtccag
cagctcggggacgcgatccaggagctggagccgaaggagcggatcgcggtcaccctgtat
tacaaggaagacctgcggctgaaggaaatcgccgaggtgatgaagctgtcggtgtcgcgg
gtgtcgcggctcctgagcaaggccacgttcgagctgggcgagcggctgaaagtccaccgc
aacggtgtactgagccacggctaa

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