Gemmata obscuriglobus: C1280_09695
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Entry
C1280_09695 CDS
T05475
Name
(GenBank) RNA polymerase subunit sigma
KO
K02405
RNA polymerase sigma factor FliA
Organism
gog
Gemmata obscuriglobus
Pathway
gog02020
Two-component system
gog02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C1280_09695
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C1280_09695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gog03021
]
C1280_09695
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
gog02035
]
C1280_09695
Transcription machinery [BR:
gog03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C1280_09695
Bacterial motility proteins [BR:
gog02035
]
Flagellar system
Flagellar assembly proteins
Stator
C1280_09695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
PhyR_sigma-like
UPF0122
MarR_2
HTH_IclR
MarR
HTH_28
CYNS_N
Rv2175c_wHTH
HTH_15
Clr5
Sigma70_ECF
HTH_38
UPF0175
TnsD
Motif
Other DBs
NCBI-ProteinID:
AWM37271
UniProt:
A0A2Z3GX94
LinkDB
All DBs
Position
complement(2389975..2390718)
Genome browser
AA seq
247 aa
AA seq
DB search
MSGNLNTGNIQAYQRQAEQQRRDELIVSHLPLVKHVIGRLIGDVPPGVDVENLESAGVLG
LVEAAAKFDPARNAQFKTFAYLRIRGAIVDEMRRNSPLPQHVHARLALVRRACRTLPHPI
TVEAIAAATGLSEDEVTDTLSAERMAKTMSWEQASESTGLEPAGGGEEPGAEMERWESVQ
QLGDAIQELEPKERIAVTLYYKEDLRLKEIAEVMKLSVSRVSRLLSKATFELGERLKVHR
NGVLSHG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaacctgaacaccggcaacatccaggcgtaccagcggcaggcggagcagcag
cggcgcgacgagctgatcgtgtcgcacctgcccctggtgaagcacgtcatcgggcgcctc
atcggcgacgtgcccccgggcgtggacgtggagaacctggagtcggccggggtgctcggg
ttggtcgaggcggcggccaagttcgaccccgcgcggaacgcccagttcaagacgttcgcg
tacctccgcatccgcggcgcgatcgtggacgagatgcggcgcaacagcccgctgccgcag
cacgttcacgcccggctcgcgctggtccgccgcgcgtgccgcaccctgccccacccgatc
acggtggaggccatcgccgccgccaccgggctgtccgaggacgaagtgaccgacacgctc
tcggccgagcgcatggcgaagaccatgtcgtgggagcaggcgtccgaatcgaccggcctg
gagccggccggcggcggcgaggagcccggcgccgaaatggagcgctgggagtcggtccag
cagctcggggacgcgatccaggagctggagccgaaggagcggatcgcggtcaccctgtat
tacaaggaagacctgcggctgaaggaaatcgccgaggtgatgaagctgtcggtgtcgcgg
gtgtcgcggctcctgagcaaggccacgttcgagctgggcgagcggctgaaagtccaccgc
aacggtgtactgagccacggctaa
DBGET
integrated database retrieval system