Gemmata obscuriglobus: C1280_14170
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Entry
C1280_14170 CDS
T05475
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gog
Gemmata obscuriglobus
Pathway
gog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1280_14170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gog03019
]
C1280_14170
03009 Ribosome biogenesis [BR:
gog03009
]
C1280_14170
Enzymes [BR:
gog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C1280_14170
Messenger RNA biogenesis [BR:
gog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C1280_14170
Ribosome biogenesis [BR:
gog03009
]
Prokaryotic type
rRNA helicases
C1280_14170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AWM42245
UniProt:
A0A2Z3HGZ9
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All DBs
Position
3441352..3442668
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AA seq
438 aa
AA seq
DB search
MLFADLKLMRPLMDAITAAGYKNPTPIQENVIPPALRGKDVIGQAQTGTGKTAAFLIPFL
NRWRPHTLKGPIGVVMTPTRELALQIANEAEKLAPSKRFRCVPVYGGTGMQRQLDGLTRG
CDLVVGTPGRMLDHLQRGSMSLSQVRYAVLDEADRMLDIGFRDDIERILKRCPSERQTLL
MSATVPDSIKRLVNRYMRDPVHLHMMPEKPTVDKIRQSYFTVDQDRKFELLKRVVEREKP
RQCLIFVERKRWADNLYRDLKRAVPKAAVIHGDLPQSQREKIMAAFRTADIKYLIATDVM
SRGIDVSGLSHVINYDLPMDIENYVHRIGRTGRIGKDGIAISFVLPEQGEHLTNIEMMIN
RLIEEDRVEGFEAAAPRASRPAAEVKVVFSGWEAAKEEKPATDDDGWGSDDAPPQSGGGN
DPKKPPFGRRGKKYSQRL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcgcggacctgaagctgatgcgcccgctcatggacgcgatcaccgccgcgggt
tacaagaacccgacgccgattcaggaaaacgtgatcccacccgccctccgcggcaaggac
gtgatcgggcaggcccagacgggcaccggaaagaccgccgcgttcctcatcccgttcctc
aaccgctggcgcccgcacaccctcaaggggccgatcggcgtcgtgatgacgccgacgcgg
gaactcgcgttgcagatcgccaacgaggccgaaaagctggcgcccagcaagcggttccgc
tgcgtgccggtctacggcggcaccgggatgcagcgccagctcgacgggctcacgcgcggc
tgcgatctcgttgtgggcaccccggggcggatgctcgaccacctccagcgggggtcgatg
tcgctgtcgcaggtccgctacgccgtactcgacgaagccgaccggatgctcgacatcggg
ttccgcgacgacatcgagcggatcctgaagcggtgcccgtcggagcggcagacgctcctc
atgtcggcgacggtcccggactcgatcaagcggctcgtgaaccgctacatgcgcgacccg
gttcacctgcacatgatgcccgagaagccgacggtggacaagatccgccagagctacttc
acggtggaccaggaccgcaagttcgagctgctgaaacgcgtcgtcgagcgcgagaagccg
cgccagtgcctgatcttcgtggagcgcaagcgctgggccgataacctgtaccgcgatctg
aagcgggcggtgccgaaggccgcggtgatccacggcgacctgccgcagtcgcagcgcgag
aagatcatggccgcgttccgcacagccgacatcaagtacctgatcgcgacggacgtgatg
agccgcgggatcgacgtgagcgggctgtcgcacgtcatcaactacgacctgccgatggac
atcgagaactacgtccaccggatcggccgcaccgggcgcatcgggaaggacggtatcgcc
atctcgttcgtgctgccggagcagggcgagcacctcaccaacatcgagatgatgattaac
cggctcatcgaagaggaccgggtcgaggggtttgaggcggcggcgccgcgtgccagccgg
ccggcagccgaggtgaaggtggtgttttcgggttgggaggccgcgaaggaagagaagccc
gcgaccgacgacgacggctggggttctgacgacgcgccgccgcaatccggtggcgggaat
gatccgaagaagccgccgttcgggcgccgtggcaagaagtacagccagcggctttga
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