Gemmata obscuriglobus: C1280_14510
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Entry
C1280_14510 CDS
T05475
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
gog
Gemmata obscuriglobus
Pathway
gog03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1280_14510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gog03400
]
C1280_14510
DNA repair and recombination proteins [BR:
gog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1280_14510
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C1280_14510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
RsgA_GTPase
AAA_29
AAA_16
AAA_21
AAA_25
DUF4350
Viral_helicase1
DnaJ_CXXCXGXG
Rad50_zn_hook
IIGP
Motif
Other DBs
NCBI-ProteinID:
AWM38084
UniProt:
A0A2Z3H8P4
LinkDB
All DBs
Position
3528633..3535784
Genome browser
AA seq
2383 aa
AA seq
DB search
MQDSKSIVVRGAREHNLRGVDLELPRNKLIVFTGVSGSGKSSLAFDTIYAEGQRRYVESL
SSYARQFLGQLPKPDVDYIGGLSPSVSIQQKTAGRNPRSTVGTITEVSDFLRVLYARLGQ
GHCPKCQRPITAQTREQIIGRILALPEGTRFQLLAPVVRGQKGEFKDFFADMVKRGYVRA
RVDGQVVKLTDDLKLDKRIKHTIEIVVDRLKADARNRVRVAEAVEQALGLAEGNLIIAVE
PETAPREGEDAEEAAGDVPPPARGADILLSAHYACTHCNISYEPPTPQLFSFNNPHGMCP
ACDGLGTQYTFAPELLVPDPSLSLYQGAIPLVGALKGMGRWRKHIYDGVAKSLGVDLKTP
WNKLSAEHQDQLLNGSGDAHIVWEWKQRGGKVWKHGGKWEGIVPQLVAQFKKTAAGPRRA
QLEKYMSRVHCPACDGQRLNPQARAVRVGGKTLVEVGRTPIGDLVPWFNEYEKNIPPVSK
VVAGELLKEIRARLGFLLNVGLHYLTLDRSAPTLSGGEAQRIRLASQIGSGLVGVLYVLD
EPSIGLHPRDNARLLASIERLRDMGNTVLVVEHDEDTMRAADYLVDFGPGPGVRGGEVVA
AGTPAEVFAEPRSLTAQYLTGKKQIAIPEKRREPSGKVLRIVGATHNNLKDVTAEVPLGL
FVCITGVSGSGKSSLINDVLRTGLSSALTGSGDAEEETEEEAGEVVERAARGRIEGAEQL
DKVIDIDQTPIGRTPRSNPATYIKLWDEIRALYAEMPDAKVRGYTPSRFSFNRPGGRCEA
CEGNGANKLEMDFLADVWVQCPVCEGRRFNRETLQVKYRGKTIQDVLEMEVAEALAHFEH
VPKVHQMVKTLHDVGLDYIKLGQPSPTLSGGEAQRIKLAKELVRRSTGKTLYILDEPTTG
LHFEDVRKLLEVLHGFADQGNTVLVIEHDLDVVKTADWVIDMGPEGGSGGGRVVVAGTPE
QVAKHKGSFTGQALAPILTPNARRTATARSTARGQLKKAKAEQPEPAQFITHLCVEGACQ
HNLKNVSAKLPREKMSVFCGPSGSGKSSLALDTIYAEGQRRYVESLSSYARQFLGQVQKP
RVEQVTGLSPAISIEQKTTSKSPRSTVGTVTEIYDYLRILYARLGQRHCPSCARPVGTQT
ADEIVDKVLSLPEGTKLYIMAPLERKGQEKYDALFEEIRRAGFTRMRVNGKSYTIDEPPQ
IDHRRKHNVEVVVDRNVVKPGTRTRIAEAVEQSLDLGRGVMHIAYVEADADETKWRVEKY
SQHLACEHCNLSFEHLNPHNYSFNSPLGWCPTCEGLGFQRGANANLLLGDTRLSLRGGAV
TAWPELGKGSAWLPFAEALAKHVGFSLDTPFAKLDPAHQRAVLHGTGDDWVSLSTETGAR
GAEPKTKKKSTAAAVPNSPLPAPRFQYKGLFPAVDEASRVSWVYRQRLDHLVDEVPCSAC
RGARIRADAAATRFANLTIGEMCAKPLGDTLALFDSLTLSKTDRKVAGEVLREVSSRLKF
MVDVGLDYLTLGRQGPTLSGGEAQRIRLASQIGSGLTGVLYVLDEPTIGLHPRDNERLLQ
ALHRLRDLGNTLVVVEHDREVIAAADHLLDFGPGAGDHGGEITASGAPKQVAKAAESLTG
KYLSGKLAIPVPTNRRTAGEGNLPPSPLPARRGSKGTSESNRESGAQGAVVDLLPSLQRG
VGSGSETVAARSPHGVTLSILGARQHNLQNVDVHIPLGALVAVTGVSGSGKSSLVNEVLY
NTLARKLHRARTAGAAHDDIVGLEHIDKIINVDQDPIGNSPSSNPATYTGVFDLIRELFA
RLPESKVRGYHPRRFSFNQKGGRCEACEGMGQKVIEMHFLPDVWVECDTCNGTRYNPETL
AVRYHGKSIADVLAMRVSEALALFHNIPKIRVVLQTLEDVGLGYMSLGQSAPTMSGGEAQ
RVKLAAELARPSTGKTLYLLDEPTTGLHFDDVRKLLEVLQRLVDLGNTVITVEHNVDVIK
SADWVIDMGPEAGGGGGHVVAAGTPEEVVAQFAAGAPTHTGRILKDVIAAGPFAARPKFD
PHAALAERAGDLDISDVGKEQKLPWEADGPGWHTRDRVTTTGKPVKWEGAALAWVIDLIH
ESGTFPETKWNHRSVVEIPAPRKADGWFLHAMTGHEAYMKLVFPLPGRPFKQDQLAAKLA
IPPLSDTPGLEGYSRDANRVEVQNTTGWQTVTITVHKKAEIDTPAFREFLKKAVELVQGL
NDSGAGGVEANMPWKKDGEKWHLGDKGFPPGRGAKWDRAVLPKLLDLLRELDPALEFKWD
TRDAVTVRPAGASRFWARLKTKETDALEVWFTGRRGTAKPAQFENVGREALVEGDRADGS
EVLKVWFATANQFAPAKLKPLLKQHLKAFKSAFGDTENEKEAG
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacagcaagagcattgtcgtgcgcggcgcccgggagcacaacctgcgcggggtg
gacctcgaactgccgcggaacaagctgatcgtgttcaccggcgtcagcgggtcggggaag
tcgtcgctggcgttcgacacgatctacgccgagggccagcgccgctacgtcgagtcgctc
tccagctacgcccgacagttcttgggccagctcccgaagccggacgtggactacatcggc
gggctgtcgccgtcggtcagcatccagcaaaaaaccgcggggcggaacccgcgcagcacg
gtcgggacgatcaccgaggtgagcgacttcctccgggtgttgtacgcccggctggggcaa
gggcactgcccgaagtgccagcgccccatcaccgcgcagacccgcgaacagatcatcggc
cgcatcctcgcgctgccggagggcacacggttccagttgctcgcgccggtggtgcgaggg
caaaagggcgagttcaaggacttcttcgcggacatggtgaagcgcgggtacgttcgcgcc
cgcgtggacggccaggtcgtcaagctgaccgacgacctcaaactcgacaagcgcatcaag
cacaccatcgaaatcgtggtggaccgcctcaaggcggacgcccggaaccgcgtccgcgtc
gccgaggcggtcgagcaggcactcgggctcgccgaagggaacctgattatcgccgtcgag
cccgagacggcgccgcgcgagggagaagacgcagaggaagcagcgggggacgtgccgccg
cccgcacggggtgcggacatcctgctttcggcgcattacgcctgcacgcactgcaacatc
agttatgagccgccgacgccgcagctcttcagcttcaacaacccgcacgggatgtgcccc
gcgtgcgacgggctcgggacgcagtacacgttcgcacccgaactcctcgttccggacccg
tccctcagcctgtaccagggggcgatccctctcgtcggcgcgctcaaaggcatggggcgc
tggcgcaagcacatttacgacggggtcgcgaagtcactcggggtggacctgaagaccccg
tggaacaagctgagcgccgaacaccaggaccagctcctcaacggcagcggcgacgcgcac
atcgtgtgggagtggaagcagcgcggcgggaaggtgtggaagcacggcgggaagtgggag
gggatcgtaccgcagctcgtggcgcagttcaaaaagacggccgccgggccgcggcgcgcg
cagctcgaaaagtacatgagccgggtccactgccccgcgtgcgacggccagcgcctgaac
ccacaagcccgcgcggtgcgcgtcggcggtaagacactggtcgaagtggggcgcactccc
atcggcgacctcgtgccgtggttcaacgagtacgaaaagaacatcccgccggtctcgaaa
gtggtcgcgggagagttactcaaggagatccgcgcccggctcgggttcctcctcaacgtc
ggcctgcactacctcaccctcgaccgttccgcccccaccctctccggcggcgaggcccag
cgcatccggctggcgtcgcagatcggcagcgggctggtcggcgtgctgtacgtgctcgac
gaaccgagcatcgggctgcacccgcgcgacaacgcccgcctgctggcgagcatcgagcgg
ctccgggatatgggcaacaccgtgctcgttgtcgaacacgacgaggacacgatgcgggcc
gccgattacctcgtggacttcggccccggtcctggcgtccgcgggggcgaagtggtcgcc
gccggcacgcccgcggaggtgttcgccgagccgcgcagcctcacggcgcaatacctgacg
ggcaagaagcaaatcgccatcccggaaaagcgccgggagccgagcgggaaggtgctgcgc
atcgtcggcgcgacccacaacaacctcaaggacgtgacggcggaggtgccgctcgggctg
ttcgtgtgcatcaccggcgtgagcgggtccgggaagtcgtcactcatcaacgacgttctg
cgcaccgggctgtcgagcgccctgaccggaagcggcgacgccgaggaagagaccgaagag
gaagcgggcgaggtcgtcgagcgcgcggcgcggggccggatcgagggcgccgagcagctc
gataaggtgatcgacatcgaccagacgccgatcggccgcaccccgcgctcgaaccccgca
acgtacatcaagctctgggacgagatccgcgcgctctacgccgagatgcccgacgccaag
gtgcgcggctacacgccgtcgcggttcagcttcaaccgccccggcgggcggtgcgaggcg
tgcgaggggaacggcgccaacaagctcgagatggacttcctcgcggacgtgtgggtgcag
tgccccgtctgcgagggccgccggttcaaccgcgaaacgctccaagtgaagtaccgcggg
aagacgattcaggacgtgctcgaaatggaggtggccgaggcgctcgcgcacttcgagcac
gtgccgaaggtccaccagatggtgaaaacgctccacgacgtggggctcgactacattaag
ctcggccagccctccccgaccctctccggcggcgaggcgcagcggatcaagctggcgaaa
gaactcgtccggcgaagcacgggcaagacgctctacatcctcgacgagccgaccacgggg
ctgcacttcgaggacgtgcgcaagctgctggaggtgctccacggcttcgcggaccaaggc
aacacggtgctcgtgatcgaacacgacctcgacgtggtgaagaccgccgactgggtcatc
gacatggggccggagggcggcagcggcggcggccgggtggtcgtcgcgggcacgcccgag
caggtcgccaaacacaagggctcgttcaccggccaggcgctcgcgccgatcctcaccccc
aacgcacgccgcaccgcgaccgcccgctccacggcacgcggacaactgaagaaggcaaag
gcggaacaaccggaaccggcgcagttcatcacgcacctctgcgtcgaaggcgcgtgccag
cacaacctgaaaaacgtgtcggccaagctgccgcgcgagaagatgtcggtgttctgcggg
ccgagcgggtccgggaagtcgtcgctcgcgctggacacgatctacgccgagggccaacgc
cgctacgtcgagtcgctctccagctacgcccggcagttcctggggcaggtgcagaagccc
cgagtcgaacaggtgacggggctctccccggccatcagcatcgaacagaagaccacgagc
aagagcccgcgcagcaccgtcggcacggtcaccgaaatctacgactacctccgcatcctg
tacgcgcgcctgggtcagcggcactgcccgagttgcgcgcggccggtcggcacccagacc
gccgacgagatcgttgacaaggtgctgtcgctgcccgaggggaccaagctctacatcatg
gcgccgcttgagcgcaaggggcaggagaagtacgacgccctgttcgaggagatccgccgg
gccggcttcacgcggatgcgcgtgaacgggaagagctacacgatcgacgagccgccgcag
atcgaccaccgccgcaagcacaacgtcgaagtggtcgtggaccggaacgtcgtgaagccc
ggcacccgcacccgcatcgcggaggccgtggagcagtcgctcgacctgggccgcggggtg
atgcacatcgcctatgtcgaggccgacgccgacgaaacgaagtggcgggtggagaagtac
tcgcagcacctcgcgtgcgagcattgcaacctgagcttcgagcacctgaacccgcacaac
tactcgttcaacagcccgctcggctggtgcccgacgtgcgaggggctcgggttccagcgc
ggcgccaacgccaacctgctcctcggcgacacgcgactctcgctgcgcgggggggcggtc
accgcgtggccggaacttgggaaaggctcggcgtggctgccgttcgcggaggcgctggcg
aagcacgtcgggttctcgctggacacacccttcgcgaaactcgaccccgcgcaccagcgc
gccgtgctgcacggtaccggcgacgactgggtcagtctcagcacagaaaccggggcgagg
ggcgcggaaccgaaaaccaagaagaagagcaccgccgcggccgttccgaattcccccctt
cccgccccgcggttccagtacaagggcctgttcccggcggtggacgaggcgtcgcgggtg
tcctgggtgtaccgacagcgcctcgatcacttggtggatgaggtgccctgctccgcctgt
cgcggtgcgcgcatccgggccgacgccgcggcgacccggttcgcgaacctcaccatcggc
gagatgtgcgcgaagccgctcggcgacacgctcgcgctcttcgactcgctcacgctctcg
aagaccgaccgcaaggtcgcgggcgaggtgctccgcgaggtcagctcgcgcctcaagttc
atggtggacgtgggcctggactaccttacgctcggccggcaggggccgacgctctctggc
ggcgaggcccagcgcatccggctggcgtcgcagatcggcagcgggctgacgggcgttctg
tacgtcctcgacgagccgaccatcgggctgcacccgcgcgacaacgagcggctccttcag
gcactgcaccggctgcgcgacctcgggaacaccctcgtcgtggtcgagcacgaccgcgag
gtgatcgcggcggccgatcacttgctcgatttcggccccggggccggagaccacggcggc
gagatcaccgccagtggcgcaccgaagcaggttgcaaaggccgcagaatcgctcacgggg
aagtacctgagcggaaagctcgccataccggttccgacgaaccggcgcacggcgggggaa
ggcaacctaccccccagccccctccctgcaaggagggggagcaaaggcacgtcggaatcg
aatcgcgaatccggcgcgcagggtgcggttgtggatctgctcccctccctgcagcgaggg
gttgggagtgggtcggagaccgtcgccgcgcggtcgccgcacggggtcacgcttagcatc
ctgggcgcccgccagcacaacctccagaacgtggacgtacacatcccgctcggggcgctc
gtcgcggtgaccggggtgagcgggtccgggaagtcgtcgctggtgaacgaggtgctctac
aacaccctcgcgcgcaagctgcaccgcgcccgcaccgccggggccgcgcacgacgacatc
gttggcctcgaacacatcgacaagatcatcaacgtcgaccaggaccccatcggcaactcg
ccgtcgagcaacccggcgacttacaccggcgtgttcgacctgatccgcgagctgttcgcc
cggctccccgagtcgaaggtccgcgggtaccacccgcggcggttctccttcaaccagaag
ggaggccggtgcgaggcgtgcgaagggatggggcagaaggtgatcgagatgcacttcctc
cccgacgtgtgggtggagtgcgacacctgtaacggcacccgttacaacccggaaacgctc
gcggtgcggtaccacggcaagagcatcgccgacgtgctcgccatgcgcgtcagcgaggcc
ctggccctgttccacaacatcccgaagatccgcgtcgtgctgcaaacgctcgaagacgtc
ggcctcgggtacatgtcactcggccagtcggcgccgaccatgtccgggggcgaagcgcag
cgcgtgaaactcgccgcggaactggcccgccccagcaccggcaaaacgctgtacctgctc
gacgagccgaccaccgggctgcacttcgacgacgtgcggaagctgctcgaagtgcttcag
cgcctggtcgatctggggaacaccgtcatcacggtggaacacaacgtcgatgtcatcaag
tccgcggactgggtcatcgacatggggccggaggccggcggcggcggcgggcacgtcgtc
gccgccggcaccccggaagaggtggtggcccagttcgccgccggcgccccgacgcacacc
gggcgcatcctcaaggacgtgatcgccgcagggccgttcgcggcgcgcccgaagttcgat
ccgcacgcggccctcgcggagcgtgccggcgatctcgacatctcggacgtgggcaaagag
cagaagctcccctgggaggccgatggccccgggtggcacacccgcgaccgcgtcaccacc
accggaaagcccgtcaagtgggagggcgccgcgctcgcctgggtcatcgacctgatccac
gagtccggcacgttccccgaaacgaagtggaaccaccgcagcgtcgtggagatccccgcg
ccgcggaaggccgacggctggttcctccacgcaatgaccgggcacgaggcgtacatgaag
ctcgtgttcccgctaccggggcgcccgttcaaacaggatcagctcgcggcaaaactcgcg
atcccgcccctgtctgacaccccggggctcgaagggtactcccgcgacgccaaccgcgtc
gaggtgcagaacacgaccggctggcagacggtcacgatcaccgttcacaagaaggcggag
atcgatacgcccgcgttccgcgagttcctgaagaaggcagtggaacttgttcagggtttg
aacgactccggagccggtggcgtggaagccaacatgccctggaagaaggacggggagaag
tggcaccttggtgataaagggttcccgcccggccggggcgcgaagtgggaccgcgccgtg
ctaccgaagctcttggatctgctccgggaactcgacccggcgctggagttcaagtgggac
acccgcgacgccgtgacggtgcggccggccggcgcgtctcgattctgggcgcggctcaag
acaaaggaaaccgacgccctggaggtgtggttcaccggccgtcgcgggacggcgaaaccg
gcccagttcgagaacgtgggccgcgaggcccttgtcgagggcgatcgcgccgacgggagc
gaggtgctgaaggtgtggttcgctaccgcgaaccaattcgctcccgcaaagctcaagccg
ctcctcaagcagcacttgaaggcgtttaagtccgcgttcggcgacacggaaaacgagaag
gaagccgggtag
DBGET
integrated database retrieval system
