Gemmata obscuriglobus: C1280_17345
Help
Entry
C1280_17345 CDS
T05475
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
gog
Gemmata obscuriglobus
Pathway
gog00541
Biosynthesis of various nucleotide sugars
gog01100
Metabolic pathways
gog01250
Biosynthesis of nucleotide sugars
Module
gog_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C1280_17345
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gog01005
]
C1280_17345
Enzymes [BR:
gog01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
C1280_17345
Lipopolysaccharide biosynthesis proteins [BR:
gog01005
]
Lipid A
C1280_17345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AWM38570
UniProt:
A0A2Z3HBH3
LinkDB
All DBs
Position
4210968..4211816
Genome browser
AA seq
282 aa
AA seq
DB search
MEPQRAVTVGPYRVGGGGPLLWICGPCVIESHDLTLRIAETLKSYADRLGLQLVFKASFD
KANRSSGKSFRGPGLQEGLKTLAAVKDATGLPVTTDIHECAQAATAAEVCDILQVPAFLA
RQTDLLEACGRTGRVVNVKKGQFMAPWDMKNVVAKLSEFGTGNVLLTERGTTFGYGMLVN
DMRSVPWMQETGAPVIFDGTHSVQKPGALGDRTGGDRAMVPVVTRAAVAAGCDGVFLETH
PRPDEAKSDGPNMIPLDVLPRVIAECVRIRAALNRPDDATAT
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcaacgagccgtcacggtgggtccgtaccgcgtcggcgggggcgggccgctg
ctgtggatctgcgggccgtgcgtgatcgagtcgcacgacctcacgctgcggatcgccgaa
accctcaagagctacgcggaccggctgggcctccagttggtattcaaggcgtccttcgac
aaggcgaaccggagttcgggcaagtcgttccgcggtcccggacttcaggaggggctgaaa
acgctcgcggcggtgaaggacgcgaccgggcttcccgtcaccaccgacatccacgagtgc
gcccaggccgcgaccgccgccgaggtgtgcgacattctgcaggtcccggcgttcctcgcc
cgccagacggacctgctggaggcgtgcggccgcaccgggcgggtggtgaacgtcaaaaag
gggcagttcatggccccgtgggatatgaagaacgtggtcgccaagctgtccgagttcggc
accgggaacgtcctcctgaccgaacgcggcacgacattcggctacgggatgctggtcaac
gacatgcggtccgtgccgtggatgcaagaaaccggtgccccggtgatctttgacggcacg
cacagcgtacagaagccaggggcgctcggggaccgcaccggcggggaccgggcgatggtg
ccggtcgtgacccgggccgcggtcgccgccgggtgcgacggggtgttcctggaaacccac
ccgcgcccggacgaggccaagagcgacggccccaacatgatcccgctcgacgtgctgccg
cgcgtgatcgccgagtgcgtgaggatccgcgcggcactgaaccgccccgacgatgccact
gccacctga
DBGET
integrated database retrieval system
