Gemmata obscuriglobus: C1280_23435
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Entry
C1280_23435 CDS
T05475
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gog
Gemmata obscuriglobus
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gog03032
]
C1280_23435
03400 DNA repair and recombination proteins [BR:
gog03400
]
C1280_23435
Enzymes [BR:
gog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C1280_23435
DNA replication proteins [BR:
gog03032
]
Prokaryotic type
DNA Topoisomerases
C1280_23435
DNA repair and recombination proteins [BR:
gog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C1280_23435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
AWM39659
UniProt:
A0A2Z3GYT5
LinkDB
All DBs
Position
complement(5709660..5712617)
Genome browser
AA seq
985 aa
AA seq
DB search
MPTSKKPAATDAAPKKPRAAKKAPAKASTKATAPESDAPVASPAGPKGGFDLVVVESPAK
AKTINKYLGPNFRVLASYGHVRDLDTKKKKGEDIAGIDIANGWKLRYTVDDGSKSEGGRK
RFRTAKEILGEIGREASRANKVYLASDPDREGESIAWHIADELKLPDATTYRIRFNEITK
NAVNAALAGAEKINDLRVSAQEARRAMDRVVGFPLSNLLGKKVASRLSAGRVQSVAVKLI
VDREREIEAFKTEEYWKITALLAAPGVKAAWTPDPAKSKIFAKKKTEAAKPVAWHKPTEE
DTQGDPDEPVVDSETADTPEGAEAAAAAPASDAGGIPTPPKDTFLANLAKWDNAEPKLAS
EADADAVVAALAGVPFVVSKAEKKTRQDRPLPPFTTSTLQQQANARMRFSASRTMQTAQK
LYEGVELTGMGQVALITYMRTDSTRVSNDALTAVRAYIQGTTFLGPRYLPAQPNAYKSGK
SAQEGHEAVRPTDVKITPKDAEKAGLGGDQLRLYTLIWQRFVASQCTPAEMDVTTYEITA
GRGLFRASGRVITFDGYRKVLPPVGRQEEPELPPVKEKDVLNRLDLFESQHFTQPPPRFN
EGSLVKALEKEGIGRPSTYASIISTIQKRGYVTQDRGRFFATEIGKVVTDLLVKHFPNIM
DTQFTSKFETELDEIETGKFRYREVLDEFWDSFSKTLKSADAEMPVARELTGEKCPKCGR
DMQKRYSTTTGGFFEGCTGYSADPPCKYIKPRPGEAEREGPTVTDIPCPACGKHMVRKVG
RFGVFYTCEGAPDCPTTMNENAEGVRTVTALPTKHKCPKCEKHNLLLKESKAGKKYVQCP
DAKCKFISDADADGAPVKPADTGVACEKCGSPMVIKVAWRGPFLSCSGYPKCRNAKSINA
ELREKLKDILPPPQEKVEKKEDPALSVEVTETCPECGAPLKLRKSRFGPGYYLGCSKGPK
CKGKGKISPELQAKIDAAVAAPAAQ
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
gtgccgacatcgaaaaaaccagcggcgaccgacgcggcaccgaagaagccccgcgccgcc
aaaaaggctcctgcaaaggcctctacgaaggccacggcccccgagagcgatgcgcccgtc
gcgtcgccggccggccccaagggcgggttcgacctcgttgtggtcgagtcgccggcgaag
gccaagaccattaacaagtacctcggcccgaatttccgggtgctggccagttatggtcac
gtccgcgacctcgacaccaagaaaaagaagggcgaggacatcgcgggcatcgacatcgcg
aacgggtggaagctgcgctacaccgtcgacgacggcagcaagtcggagggcgggcgcaag
cggttccggaccgcgaaagagatcctcggcgagatcggccgcgaggcgagccgggccaac
aaggtctacctcgcgagcgaccccgaccgcgagggcgagtcgatcgcgtggcacatcgcg
gacgaactgaagctgccggacgcgaccacctaccgcatccgcttcaacgagatcacgaag
aacgccgtgaacgcggcgctcgccggtgcggagaagatcaacgacctgcgcgtgtcggcc
caggaggcgcgccgggcgatggaccgcgtcgtggggttcccgctctcgaacctgctcggc
aagaaggtcgcgagccgtctgagcgcgggccgcgtgcagtcggtcgcggtcaagctgatc
gtagaccgcgagcgcgagatcgaggcgttcaagaccgaggaatactggaagatcaccgcg
ctgctggcggcgcccggggtgaaggcggcgtggaccccggaccccgcgaagtcgaagatc
tttgccaaaaagaagaccgaggccgcgaagccggtcgcgtggcacaagcccacggaagag
gacacgcaaggcgacccggacgaaccggtcgtggacagcgaaacggcggacacgcctgaa
ggcgccgaggccgccgccgcggcgcccgcgagtgacgcgggcggcatcccgacgccgccg
aaggacacgttcctggcgaacctcgcgaagtgggacaacgccgagcccaaactcgcgagc
gaggccgacgccgacgcggtggtcgccgcgctcgcgggcgtgccgttcgtggtgtcgaag
gcggaaaagaagacgcggcaggaccgcccgctcccgccgttcaccaccagcacgctccag
cagcaggcgaacgcgcggatgcggttcagcgccagccgcacgatgcagacggcgcagaag
ctgtacgagggtgtcgaactgaccggaatggggcaggtcgcgctgattacgtacatgcgt
accgacagcacccgcgtgtcgaacgacgcgctcaccgcggtgcgggcctacatccagggc
accacgttcctcggcccccggtacctgccggcgcagccgaacgcgtacaagtcgggcaag
agcgcgcaggaggggcacgaggcggtccgcccgacggacgtgaagatcacccccaaggac
gccgagaaggccgggctcgggggcgaccagttgcggctctacaccctgatctggcagcgg
ttcgtggcgagccagtgtacccccgccgagatggacgtgacgacctacgagatcacggcc
gggcgcgggctgttccgcgccagcggccgggtgatcacgttcgacggctaccgcaaggtg
ctgccgccggtgggccggcaggaggagcccgaactgccgccggtgaaagagaaggacgtg
ctgaaccgcctcgacctgttcgagagccagcacttcacgcagccgccgccgcggttcaac
gaaggctcgctggtgaaggcgcttgaaaaagagggcatcggccgcccgagcacctacgcg
agcatcatcagcacgatccagaagcgcgggtacgtcacgcaggaccgcgggcggttcttc
gcgaccgagatcgggaaggtggtgacggacctgctcgtgaagcacttcccgaacatcatg
gacacgcagttcacgagcaagttcgagacggagctggacgagatcgagaccggcaagttc
cggtaccgcgaggtgctggacgagttctgggactcgttctcgaaaaccctcaagagcgcc
gacgccgagatgccggtggcgcgcgagctgaccggcgagaagtgcccgaagtgcgggcgc
gacatgcagaagcggtacagcaccacgaccggcggcttcttcgagggctgcaccggctac
agcgccgacccgccgtgcaagtacatcaagccgcgcccgggcgaggccgagcgcgagggg
ccgacggtcaccgacatcccgtgcccggcgtgcggcaagcacatggtccggaaggtcggc
cggttcggcgtgttctacacgtgcgagggggcacccgattgccccacgacgatgaacgag
aacgccgagggcgttcgcaccgtcaccgcgctgccgaccaagcacaagtgcccgaagtgc
gagaagcacaacctgctcctgaaggagagcaaggcgggcaagaagtatgtgcagtgcccc
gacgcgaagtgcaagttcatcagcgacgccgacgccgacggcgcgccggtgaagccggcc
gacacgggtgtcgcgtgcgagaagtgcggcagcccgatggtgatcaaggtggcgtggcgc
gggccgttcctgtcgtgcagcgggtacccgaagtgccgcaacgcgaagtcgatcaacgcc
gagctgcgcgagaagctcaaggacatcctcccgccgccacaggagaaggttgagaagaag
gaggacccggcgctgtcggtggaagtgaccgagacgtgcccggagtgcggcgcgccgctg
aagctgcggaagtcgcggttcgggcccggctactacctgggctgctcgaaggggccgaag
tgtaagggcaaggggaagatcagccccgagcttcaggccaagatcgacgccgccgttgcc
gctccggcggcgcagtga
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