KEGG   Gemmata obscuriglobus: C1280_23435
Entry
C1280_23435       CDS       T05475                                 
Name
(GenBank) type I DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
gog  Gemmata obscuriglobus
Brite
KEGG Orthology (KO) [BR:gog00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gog03032]
    C1280_23435
   03400 DNA repair and recombination proteins [BR:gog03400]
    C1280_23435
Enzymes [BR:gog01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     C1280_23435
DNA replication proteins [BR:gog03032]
 Prokaryotic type
  DNA Topoisomerases
   C1280_23435
DNA repair and recombination proteins [BR:gog03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      C1280_23435
SSDB
Motif
Pfam: Topoisom_bac Zn_ribbon_Top1 Toprim Zn_ribbon_recom Toprim_4 DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: AWM39659
UniProt: A0A2Z3GYT5
LinkDB
Position
complement(5709660..5712617)
AA seq 985 aa
MPTSKKPAATDAAPKKPRAAKKAPAKASTKATAPESDAPVASPAGPKGGFDLVVVESPAK
AKTINKYLGPNFRVLASYGHVRDLDTKKKKGEDIAGIDIANGWKLRYTVDDGSKSEGGRK
RFRTAKEILGEIGREASRANKVYLASDPDREGESIAWHIADELKLPDATTYRIRFNEITK
NAVNAALAGAEKINDLRVSAQEARRAMDRVVGFPLSNLLGKKVASRLSAGRVQSVAVKLI
VDREREIEAFKTEEYWKITALLAAPGVKAAWTPDPAKSKIFAKKKTEAAKPVAWHKPTEE
DTQGDPDEPVVDSETADTPEGAEAAAAAPASDAGGIPTPPKDTFLANLAKWDNAEPKLAS
EADADAVVAALAGVPFVVSKAEKKTRQDRPLPPFTTSTLQQQANARMRFSASRTMQTAQK
LYEGVELTGMGQVALITYMRTDSTRVSNDALTAVRAYIQGTTFLGPRYLPAQPNAYKSGK
SAQEGHEAVRPTDVKITPKDAEKAGLGGDQLRLYTLIWQRFVASQCTPAEMDVTTYEITA
GRGLFRASGRVITFDGYRKVLPPVGRQEEPELPPVKEKDVLNRLDLFESQHFTQPPPRFN
EGSLVKALEKEGIGRPSTYASIISTIQKRGYVTQDRGRFFATEIGKVVTDLLVKHFPNIM
DTQFTSKFETELDEIETGKFRYREVLDEFWDSFSKTLKSADAEMPVARELTGEKCPKCGR
DMQKRYSTTTGGFFEGCTGYSADPPCKYIKPRPGEAEREGPTVTDIPCPACGKHMVRKVG
RFGVFYTCEGAPDCPTTMNENAEGVRTVTALPTKHKCPKCEKHNLLLKESKAGKKYVQCP
DAKCKFISDADADGAPVKPADTGVACEKCGSPMVIKVAWRGPFLSCSGYPKCRNAKSINA
ELREKLKDILPPPQEKVEKKEDPALSVEVTETCPECGAPLKLRKSRFGPGYYLGCSKGPK
CKGKGKISPELQAKIDAAVAAPAAQ
NT seq 2958 nt   +upstreamnt  +downstreamnt
gtgccgacatcgaaaaaaccagcggcgaccgacgcggcaccgaagaagccccgcgccgcc
aaaaaggctcctgcaaaggcctctacgaaggccacggcccccgagagcgatgcgcccgtc
gcgtcgccggccggccccaagggcgggttcgacctcgttgtggtcgagtcgccggcgaag
gccaagaccattaacaagtacctcggcccgaatttccgggtgctggccagttatggtcac
gtccgcgacctcgacaccaagaaaaagaagggcgaggacatcgcgggcatcgacatcgcg
aacgggtggaagctgcgctacaccgtcgacgacggcagcaagtcggagggcgggcgcaag
cggttccggaccgcgaaagagatcctcggcgagatcggccgcgaggcgagccgggccaac
aaggtctacctcgcgagcgaccccgaccgcgagggcgagtcgatcgcgtggcacatcgcg
gacgaactgaagctgccggacgcgaccacctaccgcatccgcttcaacgagatcacgaag
aacgccgtgaacgcggcgctcgccggtgcggagaagatcaacgacctgcgcgtgtcggcc
caggaggcgcgccgggcgatggaccgcgtcgtggggttcccgctctcgaacctgctcggc
aagaaggtcgcgagccgtctgagcgcgggccgcgtgcagtcggtcgcggtcaagctgatc
gtagaccgcgagcgcgagatcgaggcgttcaagaccgaggaatactggaagatcaccgcg
ctgctggcggcgcccggggtgaaggcggcgtggaccccggaccccgcgaagtcgaagatc
tttgccaaaaagaagaccgaggccgcgaagccggtcgcgtggcacaagcccacggaagag
gacacgcaaggcgacccggacgaaccggtcgtggacagcgaaacggcggacacgcctgaa
ggcgccgaggccgccgccgcggcgcccgcgagtgacgcgggcggcatcccgacgccgccg
aaggacacgttcctggcgaacctcgcgaagtgggacaacgccgagcccaaactcgcgagc
gaggccgacgccgacgcggtggtcgccgcgctcgcgggcgtgccgttcgtggtgtcgaag
gcggaaaagaagacgcggcaggaccgcccgctcccgccgttcaccaccagcacgctccag
cagcaggcgaacgcgcggatgcggttcagcgccagccgcacgatgcagacggcgcagaag
ctgtacgagggtgtcgaactgaccggaatggggcaggtcgcgctgattacgtacatgcgt
accgacagcacccgcgtgtcgaacgacgcgctcaccgcggtgcgggcctacatccagggc
accacgttcctcggcccccggtacctgccggcgcagccgaacgcgtacaagtcgggcaag
agcgcgcaggaggggcacgaggcggtccgcccgacggacgtgaagatcacccccaaggac
gccgagaaggccgggctcgggggcgaccagttgcggctctacaccctgatctggcagcgg
ttcgtggcgagccagtgtacccccgccgagatggacgtgacgacctacgagatcacggcc
gggcgcgggctgttccgcgccagcggccgggtgatcacgttcgacggctaccgcaaggtg
ctgccgccggtgggccggcaggaggagcccgaactgccgccggtgaaagagaaggacgtg
ctgaaccgcctcgacctgttcgagagccagcacttcacgcagccgccgccgcggttcaac
gaaggctcgctggtgaaggcgcttgaaaaagagggcatcggccgcccgagcacctacgcg
agcatcatcagcacgatccagaagcgcgggtacgtcacgcaggaccgcgggcggttcttc
gcgaccgagatcgggaaggtggtgacggacctgctcgtgaagcacttcccgaacatcatg
gacacgcagttcacgagcaagttcgagacggagctggacgagatcgagaccggcaagttc
cggtaccgcgaggtgctggacgagttctgggactcgttctcgaaaaccctcaagagcgcc
gacgccgagatgccggtggcgcgcgagctgaccggcgagaagtgcccgaagtgcgggcgc
gacatgcagaagcggtacagcaccacgaccggcggcttcttcgagggctgcaccggctac
agcgccgacccgccgtgcaagtacatcaagccgcgcccgggcgaggccgagcgcgagggg
ccgacggtcaccgacatcccgtgcccggcgtgcggcaagcacatggtccggaaggtcggc
cggttcggcgtgttctacacgtgcgagggggcacccgattgccccacgacgatgaacgag
aacgccgagggcgttcgcaccgtcaccgcgctgccgaccaagcacaagtgcccgaagtgc
gagaagcacaacctgctcctgaaggagagcaaggcgggcaagaagtatgtgcagtgcccc
gacgcgaagtgcaagttcatcagcgacgccgacgccgacggcgcgccggtgaagccggcc
gacacgggtgtcgcgtgcgagaagtgcggcagcccgatggtgatcaaggtggcgtggcgc
gggccgttcctgtcgtgcagcgggtacccgaagtgccgcaacgcgaagtcgatcaacgcc
gagctgcgcgagaagctcaaggacatcctcccgccgccacaggagaaggttgagaagaag
gaggacccggcgctgtcggtggaagtgaccgagacgtgcccggagtgcggcgcgccgctg
aagctgcggaagtcgcggttcgggcccggctactacctgggctgctcgaaggggccgaag
tgtaagggcaaggggaagatcagccccgagcttcaggccaagatcgacgccgccgttgcc
gctccggcggcgcagtga

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