Gemmata obscuriglobus: C1280_23455
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Entry
C1280_23455 CDS
T05475
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gog
Gemmata obscuriglobus
Pathway
gog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C1280_23455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gog03400
]
C1280_23455
Enzymes [BR:
gog01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C1280_23455
DNA repair and recombination proteins [BR:
gog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C1280_23455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
PIF1
AAA_22
DEAD
nSTAND3
AAA_28
SLFN-g3_helicase
UvrD-helicase
AAA
AAA_5
NTPase_1
HHH
NPHP3_N
PhoH
AAA_16
AAA_29
bpMoxR
HHH_3
AAA_24
T2SSE
Herpes_Helicase
MeaB
ATPase_2
ABC_tran
TsaE
HerA_C
TrwB_AAD_bind
DUF815
SKI
Mg_chelatase
AAA_14
Thymidylate_kin
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AWM42358
UniProt:
A0A2Z3H9E9
LinkDB
All DBs
Position
5718384..5720642
Genome browser
AA seq
752 aa
AA seq
DB search
MTEQVTGVIERITHHNPDTGYCVLRVLARGHRDIVTVIGSAQQVVAGEYVTATGVWVNDR
NYGKQFKAAEVKTNPPHTKEGIVKYLGSGLVKGIGPGYARRIVDVFGDRTLEVIDATPVM
LTQVKGIGPKLVEKIRKSWEEQRESQKILVFLQSHGIGTARAVRIYKTYGDQAIELIKAN
PYRLSGDIWGFGFKTADQLAVSLGIPPDSPFRAQAAVRHVLQEETGNGHVGFPEELLREK
AAELTGIEPNGIIDAVEQLRITDEIVRDSVGKATGGKVNAPPPQPQSPGEGPDGEPAKVR
ISEEDLLFLKPMFLAEVGVARSIRALAAGPHPLPSVNVEAAVNWIEQKMGIAFATSQRAA
IKAAVTNKMMVVTGGPGTGKTTIVRAIIEMFLAKSLRVLLTAPTGRAAKRLNESTGREAK
TIHRLLEFNPQQRQFTRNAENPLDVDLLVVDETSMVDVVLMNRLLQAVPPYACVVLVGDV
DQLPSVGAGSVLTDLIDSKVVPVARLTEVHRQAESSWIVRAAHAINSGQEPQSAPAGGDG
DFYFVEANDADTVIQRVVQMVKERIPARFNLNPFRDIQVLSPQVKTALGVANMNRELQQA
LNPARPGLAEVQRNGETYRIGDKVMQVQNNYDREVFNGDIGRIDAIDTDEQMLVVDYDGR
FVEYEFSDLDELQLSFACTIHKSQGSEYPAVVIPVHTQHFVMLQRNLLYTGITRGRKLVA
LVGSRKAMRIAVSTADTKKRFSLLKWRIKPQD
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcaagtgaccggcgtcatcgaacgcatcacacaccacaacccggacaccggg
tactgtgtgctgcgtgtgctcgcgcgcggccaccgcgacatcgtgaccgtaatcggcagc
gcccagcaggtggtggcaggcgagtacgtcaccgcgaccggcgtgtgggtcaacgaccgc
aactacggaaagcagtttaaagcggcggaggtcaagacgaacccgccgcacaccaaggag
ggcatcgtcaagtacctcgggtcggggctggtgaagggcatcggtcccgggtacgcgcgg
cgcatcgtggacgtgttcggcgatcgaacgctggaggtgatcgacgccacccccgtcatg
ctcacgcaggtgaagggcatcggcccgaaactcgtcgagaagatccgcaagagctgggag
gagcagcgggaatcgcagaagatcctggtgttccttcagtcgcacgggatcggcaccgcg
cgggcggtacgcatctataagacctacggcgaccaggcgatcgagctgatcaaagccaac
ccgtaccgactgagcggggacatctgggggttcgggttcaagaccgccgatcaactggcg
gtgagcctcggcatcccgcccgactcgccgttccgggcgcaggcggcggttcggcacgtg
ctccaggaggaaacggggaacgggcacgtcggctttccagaggagttgctccgggagaag
gccgccgagctcaccgggatcgaaccaaacgggatcatcgacgccgtcgaacagttgcgc
atcaccgacgagatcgtgcgcgacagcgtcggcaaggcgaccggggggaaggtcaacgcc
ccgccacctcaaccccagtccccgggagagggaccggacggtgaaccggcgaaggtccgc
atctccgaagaggacctcctgttcctcaagccgatgttcctggcagaagtcggggtcgcg
cggtcgatccgggcgctggcggccggcccgcaccccttgccgtcggtgaacgtcgaggcc
gcggtcaactggatcgaacagaaaatggggatcgcgttcgcgaccagccagcgcgccgcg
atcaaagccgcggtcaccaacaagatgatggtggtcaccggcggccccgggaccggcaag
accaccatcgtccgggccatcatcgagatgttcctggcgaagtccctccgggtgctgctg
acggcccccaccgggcgcgcggcgaagcggttgaacgagtccaccgggcgagaagcgaag
accatccaccgcctgctcgagttcaacccgcagcagcggcagttcacccgcaacgcggag
aacccgctcgacgtggacctgctcgtcgtcgacgagacgtcgatggtcgatgtcgtgctg
atgaacaggcttctgcaagcggtgccgccgtatgcgtgcgtcgtgctggtcggcgacgtc
gatcagctcccgtcggtgggcgcgggctccgttctgacggacctcatcgactcgaaggtg
gtgccggtggcccggctcacggaagttcaccggcaggcagaaagtagctggatcgtccgg
gcggcccacgcgatcaacagcggacaggaaccgcagtccgcgccggcgggcggggacggc
gatttctatttcgtcgaagcgaacgacgccgacaccgtgatccagcgcgtcgttcagatg
gtgaaggagcggatccccgcccggttcaacctgaacccgttccgcgacattcaggtgctg
tcgccgcaggtcaaaaccgcgctcggcgtggcgaacatgaaccgcgaactccaacaggca
ctgaaccccgcccgccccggcctggccgaggtgcagcggaacggcgaaacgtaccggatc
ggcgacaaggtgatgcaggttcagaacaactacgaccgcgaggtgttcaacggcgacatc
ggccgcatcgacgccatcgacaccgacgaacagatgctggtggtggactacgacgggcgg
ttcgtggagtacgagttcagcgacctggacgagttgcagctctcgttcgcctgcaccatt
cacaagtcacaggggagcgagtacccggcggtggtgatcccggtccacacgcagcacttc
gtgatgctccagcggaacctgctgtacaccggcatcacccgcggccggaagctcgtggcc
ctggtcggcagccgaaaggcgatgcggatcgcggtcagcacggcggacaccaagaagcgg
ttctcgctactgaagtggcggatcaaaccgcaagactga
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