Gemmata obscuriglobus: C1280_27915
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Entry
C1280_27915 CDS
T05475
Name
(GenBank) PAS domain S-box protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
gog
Gemmata obscuriglobus
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gog03000
]
C1280_27915
Transcription factors [BR:
gog03000
]
Prokaryotic type
Helix-turn-helix
Other families
C1280_27915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
PAS_4
GAF
PAS_8
HTH_8
PAS_9
Mg_chelatase
AAA
HTH_30
MCM
AAA_16
PAS
AAA_2
AAA_3
PAS_3
AAA_22
AAA_7
TIP49
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
AWM40434
UniProt:
A0A2Z3HF84
LinkDB
All DBs
Position
complement(6716328..6718199)
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AA seq
623 aa
AA seq
DB search
MPELNQPADREEVAALRAIVEGTARHTGEEFFRSLVRNLSAATGVPNAFVAEFAEQRTRI
RSLAFWQDGAFLPPDEWELAGTPCEDVLAGSFCHHPTGVSEKFPKDAGVESYLGVPLRDA
SGAVLGHLAVFDARPMPPEPRLLYTFQIFAARAAAELDRLRMDRMLRDSEERFRDLFEEA
PVAYVHEDMESRFIRANRTALRVLGLKPEEAVGTVGMSLVPDTPDAQRLVKEAFASIGRG
TDTGGVVLELRRKDDGRPIWIQWWSRPDRGGQFTRTVFIDVTERVLMEREQARLQQQNVY
LQEELKAAHNFDEIVGQSPALVSVLQRVSKVAGTDSTVLITGETGTGKELVARAVHSASP
RKAKPLIKLNCAALPTHLVESELFGHEKGAFTGAVARKPGRFELADGGTLFLDEVGELSL
EAQAKLLRVLQEREFERVGGTAPVKVDVRVIAATNRDLAQLVKEGAFRADLLYRLNVFPV
RLPALRERPGDIPLLVRFFVTKFAGRLGKRIERVSGDTLDALVGYDWPGNIRELENVIER
AAILSDGPELVIDPDVLPVTRGGAAPAGAGGQSLVAVEADHIRSVLAQTGWVIEGPNGAA
TVLGLHPNTLRSRMKKLGILRPS
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactcaaccaacccgcggaccgcgaggaagtggccgcgctccgcgccattgtc
gagggcaccgcccggcacaccggcgaagagttttttcgctcgctcgtgcggaacctgagc
gcggcgaccggcgtcccgaacgccttcgtggccgagttcgccgagcagcggacccgcatc
cggtcgctcgcgttttggcaggacggggcgttcctcccgcccgacgaatgggaactggcc
ggcacgccgtgcgaggacgtgctcgcggggagcttctgccaccacccgaccggcgtgtcg
gagaaatttccgaaggacgcgggcgtcgagagctacctcggggtgcccctccgcgacgcg
agcggggcggtactcggccacctcgcggtgttcgacgcccgcccgatgccccccgagccg
cggctgctctacacgttccagatcttcgccgcccgtgccgccgcggaactcgaccggctg
cgcatggaccggatgctccgcgacagcgaagagcgcttccgggatttgttcgaggaggcc
ccggtcgcctacgttcacgaggacatggagtcgcgcttcatccgcgccaaccggaccgcc
ctgcgcgtcctgggcctgaagccggaagaagcggtcggcaccgtcggcatgtcgctggtg
cccgacacgcccgacgcccagcggctggtaaaagaagccttcgcctccatcggccgcggc
accgatacgggcggcgtggtgctcgagctccgccgcaaggacgacgggcgcccgatctgg
attcagtggtggtcgcggcccgaccgcgggggccagttcacccgcaccgtgttcatcgac
gtcaccgagcgcgtgctgatggagcgggagcaggcgcggctccagcaacagaacgtctac
ctccaggaagagctcaaggcggcacacaacttcgacgagatcgtcggccaaagtccggcg
ctcgtgtcggtgttgcagcgcgtgtcgaaggtggccggcaccgattcgacggtcctcatc
accggcgaaaccggcaccggcaaggaactggtcgcgcgggcggtccactccgccagcccc
cggaaggcgaagccgctcatcaagctgaactgcgccgcgctgccgacgcacctcgtcgag
agcgagttgttcgggcacgagaagggggcgttcaccggggccgtcgcgcgcaagccggga
cggttcgagctggccgacggcggcacgctgttcctcgacgaggtcggtgagttgtcgctg
gaggcccaggcgaagctgctccgcgtactccaggagcgcgagttcgagcgcgtcggcgga
acggcaccggtgaaggtggacgtgcgggtgatcgcggcgaccaaccgcgacctcgcccaa
ctggtcaaggagggggcgttccgcgccgacctcttgtaccggctcaacgtcttcccggtg
cgcctgccggcgctgcgcgagcgccccggcgacatcccgctcctggtgcggttcttcgta
accaagttcgcggggcggctcggcaagcggatcgagcgggtgagcggggacacgctggac
gcgctggtcggctacgactggccgggcaacatccgcgaactggagaacgtcatcgagcgc
gcggcgatcctgtccgacggcccggagctggtcatcgacccggacgtgctgccggtcacg
cgggggggcgccgcgcccgccggggccggcggccagagcctcgtcgcggtcgaggcggac
cacattcgcagcgtcctcgcgcaaaccggctgggtgatcgaggggccgaacggggccgcg
acggtgctcggcctgcacccaaacacgctccgcagccggatgaagaagctcggcatcctg
cggccgtcgtag
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