Gemmata obscuriglobus: C1280_31510
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Entry
C1280_31510 CDS
T05475
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gog
Gemmata obscuriglobus
Pathway
gog03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C1280_31510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gog03021
]
C1280_31510
03400 DNA repair and recombination proteins [BR:
gog03400
]
C1280_31510
Enzymes [BR:
gog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C1280_31510
Transcription machinery [BR:
gog03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C1280_31510
DNA repair and recombination proteins [BR:
gog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C1280_31510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
TPR_2
TPR_8
TPR_1
TPR_16
TPR_6
TPR_14
TPR_7
TPR_19
TPR_17
TPR_12
TPR_9
ANAPC3
TPR_CcmH_CycH
TPR_5
TPR_15
Wzy_C_2
Motif
Other DBs
NCBI-ProteinID:
AWM42474
UniProt:
A0A2Z3HKX3
LinkDB
All DBs
Position
7648916..7650229
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AA seq
437 aa
AA seq
DB search
MVGRLREGLAQGGPQVRNLKDILDTLNKRLAVAAPPQQKKVHLKIGVASYFLGHVRSAID
HLNKAEGPLAAFFLGQAHVALGQSRQYSEDQSDTTDHYGEAVKAFERAEKSGYAAQQVQL
QRAGVLRLQGHVGESKAILTKLKDAAAHNAEYYYQEGSLAEAEGDTPRAAKYYERAVELE
PRHSASLFRLGFLNDQQGNDHEAIGYYERCLKYPPVGKGVLYNLGVLYEDNDMYDKAADC
YRRLAKADPRDERAKLFVKDSEASLTMHYSPEDEQLTQANRVVLEIPITDFELSVRSRNC
LKRMNIRTLGDLTRVTEPQLLASKNFGETSLDEIRAIMVTKGLRIGQSLDQGQQYEFRYR
PQQNLSPEEQATLGKPVSDLNLSVRARKCMNRLNIGTLGELVQRTADELLEAKNFGQTSL
TEVRERLQQFNLKLRGD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggtcggtcggctccgcgaggggctggcgcagggcggcccgcaggtccggaacctcaaa
gacatcctcgacacactcaacaagcggctcgcggtcgcggcgccgccccagcagaagaag
gtccacctgaaaatcggggtggccagctacttcctcggccacgtccgcagcgccatcgac
cacctcaacaaggccgaaggcccgctggcggcgttcttcctgggccaagcgcacgtcgcc
ctggggcagtcccgccagtacagcgaggaccagtccgacaccaccgaccactacggcgag
gccgtgaaggcgttcgagcgggccgagaagtccggctacgcggcccagcaggtgcagctc
cagcgcgccggggtgctgcgcctccaggggcacgtgggcgaatccaaggccatcctcacg
aagctgaaggacgccgccgcccacaacgccgagtactactaccaggaaggctcgttggcc
gaggccgagggcgacaccccccgggccgcgaagtactacgagcgggccgtcgagctggag
ccgcggcactccgcctcgctgttccggctcgggttcctgaacgaccagcagggcaacgac
cacgaggccatcggctactacgagcggtgcctgaagtacccgccggtcggcaagggcgtg
ctgtacaacctcggcgtgctgtacgaagacaacgacatgtacgacaaggccgcggactgc
taccggcggctcgccaaggccgacccgcgcgacgagcgcgcgaagctgttcgtgaaggac
tccgaagcgtccctcacgatgcactacagcccggaggacgagcagctcacccaggccaac
cgcgtcgtgctcgagatcccgatcaccgacttcgagctgtcggtgcggagccgcaactgc
ttgaagcggatgaacatccggacgctcggcgacctcacccgcgtcaccgagccgcagctc
ctggcgagcaagaattttggcgagacctcgctcgacgagatccgcgccatcatggtgacg
aaggggctgcggatcgggcagtcgctggaccaggggcagcagtacgagttccggtaccgg
ccgcagcagaacctcagcccggaggagcaggccacgctcggcaagccggtgagcgacctg
aacctctcggttcgcgcccggaagtgcatgaaccgcctcaacatcggcacgctgggcgaa
ctcgtccagcgcaccgccgacgagctgctggaggcgaagaacttcggtcagacctcgctg
accgaggtgcgtgagcggctccagcagttcaacctcaagctccgcggggactga
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