Gemmata obscuriglobus: C1280_33820
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Entry
C1280_33820 CDS
T05475
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gog
Gemmata obscuriglobus
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gog03019
]
C1280_33820
Messenger RNA biogenesis [BR:
gog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C1280_33820
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Ortholog
Paralog
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
AWM41491
UniProt:
A0A2Z3H9C0
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All DBs
Position
8191982..8192986
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AA seq
334 aa
AA seq
DB search
MARRFVEQLRDGDNLEDVYLVTDKQLRANRNGNPYLLVELRDRTGGIQGRMWNAGDSIAR
GFDPGDFLFATGKVQLFQGALQAILTAVERVEPQKVEFADFLPQTEHSIPKLTERLKGYL
LRLGNPHLRALAECFLMDDEFMRAFATCPAGVKLHHAYVGGLLEHTVSMMDIADKVLALY
PGTDRDLVLMGVLLHDAGKTRELTFSRAFGYSDEGQLVGHIPIAVAMLAETAAKVPDLTG
EPFPRELMLRLQHMILSHHGELSYGSPKVPMTPEAMLLHLIDAMDTRMHMVLRELKDDRN
NPTAWTPYNHNLGRRVYKGGAFGDLFGESGGGYD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgtttcgtcgaacagctccgcgacggggacaacctcgaagacgtgtacctc
gtgacggacaagcagctccgcgcgaaccggaacgggaacccgtacctccttgtagaactg
cgggaccgcaccggcggcatccagggccgcatgtggaacgccggcgacagcatcgcgcgc
gggttcgaccccggcgacttcctgttcgccaccggcaaggtgcaactgttccagggcgcg
ctgcaggccatcctgacggcagtcgagcgggtggagccgcagaaggtcgagttcgccgac
ttcctgccgcagaccgagcacagcatcccgaagctcacggagcgcttgaagggctacctg
ctccggctcggcaacccgcacctgcgggcgctcgccgagtgcttcctcatggacgacgag
ttcatgcgggcgttcgcgacgtgcccggccggggtgaagctgcaccacgcctacgtgggg
gggctgctggagcacacggtctcgatgatggacatcgcggacaaggtgctcgcgctgtac
cccggcacggaccgcgacctcgtgctgatgggcgtgctgctgcacgacgcgggcaagacc
cgggagctgaccttctcgcgcgccttcgggtactccgacgaggggcaactggtcgggcac
atcccgatcgccgtggcgatgctcgccgagaccgcggccaaggtgccggacctgaccggg
gagccgttcccgcgggagctgatgctccggctccagcacatgatcctgagccaccacggg
gagctgagctacggcagcccgaaggtgccgatgacccccgaggcgatgctgctgcacctg
atcgacgcgatggacacgcgcatgcacatggtgctgcgcgagctgaaggacgaccgcaac
aacccgaccgcgtggacgccgtacaaccacaacctgggccgccgtgtttacaagggcggg
gccttcggcgacctgttcggcgagtccggcggcgggtacgactga
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