Gemmata obscuriglobus: C1280_35585
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Entry
C1280_35585 CDS
T05475
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
gog
Gemmata obscuriglobus
Pathway
gog00521
Streptomycin biosynthesis
gog00523
Polyketide sugar unit biosynthesis
gog00525
Acarbose and validamycin biosynthesis
gog00541
O-Antigen nucleotide sugar biosynthesis
gog01100
Metabolic pathways
gog01110
Biosynthesis of secondary metabolites
gog01250
Biosynthesis of nucleotide sugars
Module
gog_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
C1280_35585 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C1280_35585 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
C1280_35585 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C1280_35585 (rfbB)
00525 Acarbose and validamycin biosynthesis
C1280_35585 (rfbB)
Enzymes [BR:
gog01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
C1280_35585 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
AWM42528
UniProt:
A0A2Z3H9Y2
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All DBs
Position
8596616..8597629
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AA seq
337 aa
AA seq
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MPTVLITGGAGFIGSNFVRHLLATDPAVQIVNFDALTYAGNLANLRDLDGHPRHTFVRGD
VTSRDDVRGAMQRGVTDVIHFAAESHVDRSIHDSGPFVRTNVLGTQVLLDAAREFQVSKY
VQVSTDEVYGSLGATGLFTEETPLHPNSPYSASKAGADLLVQAYQHTFGLPAVITRCSNN
YGPYQLPEKLIPLFVTNLLADQQVPVYGDGQQVRDWIHVLDHCRGVEAAWRRGAPGEVYN
FGGRCEMANLDLTLLLLKLLGKPETLIKYVADRLGHDRRYAIDCTKAERELGWAPQVKFD
AGLAETIGWYKANTAWVATIKNKDYLSYYEKQYGKRG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgccgacagttttgatcaccggcggtgccgggttcattgggtccaacttcgtccgccac
ctgctggcgaccgaccccgccgtacagatcgtcaacttcgacgcgctgacctacgcgggc
aacctcgcgaacctccgcgacctcgacggccacccgcggcacacgttcgtgcggggcgat
gtcacctcccgcgacgacgtgcgcggcgcgatgcagcgcggggtgacggatgtcatccat
ttcgcggccgagagccacgtggaccgtagcatccatgacagcggcccgttcgtgcggacc
aacgtgctgggcacgcaggtgctgctcgacgcggcccgcgagttccaggtgagcaagtac
gttcaggtctcgaccgacgaggtgtacgggagcctgggcgcgaccgggctgttcaccgaa
gagacccccctgcacccgaacagcccgtactcggcgagtaaagcgggcgcggacctgctc
gtgcaggcgtaccagcacacgttcgggctgccggcggtgatcacgcggtgctcgaacaac
tacgggccgtaccagctccccgagaaactgatcccactgttcgtgaccaacctgctcgcc
gaccagcaggtgccggtgtacggcgacggccaacaggtccgcgactggattcacgtgctc
gaccactgccgcggggtcgaggccgcgtggcgccgcggggcgcccggtgaggtgtacaac
ttcggcggccggtgcgagatggcgaacctggacctcacgctgctcctgctcaagctcctc
ggcaagcccgagacgctcatcaagtacgtggccgaccgcttggggcacgaccggcggtac
gcgatcgactgcacgaaggccgagcgcgaactgggctgggcgccgcaggtgaagttcgac
gcggggttggccgagacgatcggctggtacaaggccaacaccgcgtgggtggcgacgatc
aagaacaaggactacctgagctactacgagaagcagtacgggaaacggggatag
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