Gluconobacter oxydans H24: B932_0072
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Entry
B932_0072 CDS
T02348
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
goh
Gluconobacter oxydans H24
Brite
KEGG Orthology (KO) [BR:
goh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
goh03016
]
B932_0072
Enzymes [BR:
goh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
B932_0072
Transfer RNA biogenesis [BR:
goh03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
B932_0072
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
AFV99682
LinkDB
All DBs
Position
70421..70984
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AA seq
187 aa
AA seq
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MRLFVALDLSPAQREALALLRGSLPGVQWVPSENYHLTLRFIGEITDRYVMEEIDLALSR
LAWKPFDVSFHGADLREGMTADSLMIGTERSEALTTLQTQVESVLRKAGCAPAKRRFQPS
VTLGHLATTQRADAARWVQRHNLFRSEPMPVHHVTLFESLRGYDQHVYVARAEYAWHPDM
PLLPEDE
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
ttgagactttttgtcgcactcgacctctcccccgcccagcgcgaagcgcttgctcttctc
agaggttcactgccgggcgtgcagtgggttccttccgagaactatcatctgaccctccgt
tttatcggtgagattaccgatcgctacgtgatggaagagattgatcttgctctttcgcgg
ctggcctggaagccattcgatgtctctttccacggcgcagacctccgcgaaggcatgact
gctgacagcctcatgatcggcactgaacgatccgaagcactcactacacttcagacgcag
gttgaaagcgttctacgcaaagccggatgcgcacctgcaaaacgccgttttcagcccagc
gtaactcttgggcaccttgcaacgacccaacgtgccgatgcagcccgctgggttcagagg
cataatcttttcagaagtgagccaatgcccgttcaccacgttacgctctttgagagcctg
cgtgggtacgatcagcatgtctatgttgcccgcgcagaatatgcctggcacccggacatg
ccacttcttcctgaggatgaatga
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