Gluconobacter oxydans H24: B932_0216
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Entry
B932_0216 CDS
T02348
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
goh
Gluconobacter oxydans H24
Brite
KEGG Orthology (KO) [BR:
goh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
goh03016
]
B932_0216
Enzymes [BR:
goh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B932_0216
Transfer RNA biogenesis [BR:
goh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B932_0216
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AFV99824
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All DBs
Position
222737..223381
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AA seq
214 aa
AA seq
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MSQQNAIHLHDGDLPDDFDIGPVVAIDTETMGLNPHRDRLCLVQLSAGDGEAHLVQIKPV
SMGGRGYDCPNLKALLSDESITKLMHFARFDVAVLQHALGITISSVICTKIAARLVYTFT
DRHGLAYLCRDLLGVEMSKHQQSSDWGADILTEDQKRYAASDVLHLHALWEKLEAMLIRE
NRRELAQSCFDFLSARARLDLLGYENPDIFAHRA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcagaacgccatccatcttcatgacggcgacctgccggacgattttgatatt
ggccctgttgtcgccatcgataccgagaccatgggtctcaatccccacagagatcgcctc
tgcctcgtgcagctttccgccggtgacggcgaagcacatcttgtgcagatcaagcctgtt
tcgatgggcgggcgcggttatgactgccccaacctcaaggccctcctgtcggatgagtcc
atcaccaagctgatgcacttcgcacgctttgatgtagccgttctccagcatgctctgggc
atcaccatttcctccgtcatttgcaccaagattgccgcacgtctggtctataccttcacg
gaccgtcatggcctggcctatctttgccgcgatctgctgggggtagaaatgagcaagcac
cagcagagctccgactggggggcagacatcctcacggaagaccagaagcgctatgctgcg
tctgacgtgctgcatctgcacgccctgtgggagaaactggaagccatgctgatccgggaa
aaccgccgtgaactggcgcagtcatgctttgatttcctgtcggcccgcgcccgtcttgat
cttctgggatatgaaaatcccgatatcttcgcacaccgcgcataa
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