Gluconobacter oxydans H24: B932_0523
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Entry
B932_0523 CDS
T02348
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
goh
Gluconobacter oxydans H24
Pathway
goh03410
Base excision repair
goh03430
Mismatch repair
goh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
goh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B932_0523
03430 Mismatch repair
B932_0523
03440 Homologous recombination
B932_0523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goh03400
]
B932_0523
DNA repair and recombination proteins [BR:
goh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
B932_0523
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B932_0523
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B932_0523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
CDC45
Motif
Other DBs
NCBI-ProteinID:
AFW00130
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Position
522979..524778
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AA seq
599 aa
AA seq
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MLEDDTGLVLGVSRSAGNRRWIWRDPRLAEADNRLALGLAQRAAIPELLARILTARGVTA
TDAASFLDPRLRDLMPDPSCLQDMDAAAARLAEAVRNREHVGLFGDYDVDGACGTALVCD
TLREMGCTVSTHIPDRMTEGYGPNTPALEKLVAEGATLLVCIDCGTAAIDILNGFHEQTD
VIVLDHHKPDGSILPKGIVVNPNRLDCTSDLGTICATAVAFLTMVATARLLRREGWFTDG
RQPPDLLKRLDLAALATICDVMPLTGLNRALVMQGLRVMGRGERLGLATLSSVAGVKEEA
SAMACGFALGPRINAGGRIAKANLGLRLLLSDDVVEARALADELDSVNRQRQSVEAGILA
QAMEQAEQQIEDGHAVIFLHGEAWHPGVVGIVAGRLKERFNRPALVGAFADEIIKGSARS
VPGLDIGAAIITARQSGLLVTGGGHAMAAGFSLTADNATVFHEFLDATLSEARALPVQEA
LRIDGLLTLRGASLEVASQLARLAPFGPGNEEPVLAISNVRCVKSDRIGKDGNTLRLMFQ
GEDGGARLKALVFRAGDKPYVSLLEDRTMPLLHLAGHLRVETWQERQNLTFFISDVSGA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgttagaagacgatacgggcctggttctcggagtatcccgcagcgcaggcaaccgtcgg
tggatctggcgcgatccacgtctggcagaggcggataaccgcctcgccctcggtctggcc
cagcgcgcggccattccagaacttctggcccgtatcctgacagcccgtggcgtcactgcc
acggacgcggcgtcctttctggacccacgcctccgcgaccttatgcctgacccatcctgt
ttacaggatatggacgcggccgctgcccgactggcggaggctgttcgcaatcgggagcat
gtgggtcttttcggcgattatgacgtcgatggggcctgcggcacagcactggtctgcgat
acgcttcgtgaaatgggctgcacggtcagcacccatatccccgatcggatgaccgagggc
tacggccctaacacgcctgctctggaaaaacttgtcgccgagggcgcgacccttttggtc
tgcatcgactgtggaacagccgccatcgacattctgaacggcttccatgagcagaccgac
gtcattgttctggatcaccacaagccagacggctccattctgccaaagggcatcgtggtc
aatccgaacaggctggattgcacatcggacctcggaacgatttgcgcgacggccgtcgcc
ttcctgacgatggtcgctaccgcccgactgctcaggcgcgaaggttggttcacggatgga
cgtcaaccacccgaccttctcaagcgccttgatctcgcggccctcgccacgatctgcgat
gtcatgcccctgacgggcctgaaccgcgcccttgtcatgcaaggattgcgcgtcatgggg
cgtggagaacgccttggcctggcgaccctgtcttccgtggcgggcgtcaaggaagaagcc
agcgccatggcctgcggttttgcgcttggcccccggatcaatgccggtggccggattgcc
aaggccaatctgggcctgcgcctcctcctgtctgacgacgtggtcgaagcccgggctctg
gcggatgaacttgatagcgtcaatcgccagcgccaaagtgtggaagccggcattctggct
caggccatggaacaggccgaacagcagattgaagacggccacgctgttatctttctacac
ggagaggcatggcatccgggtgtcgtgggaattgtcgcgggacgtctgaaggaacggttc
aaccgccctgcccttgtaggggcttttgcagatgaaatcatcaagggatctgcacggtcc
gtgccggggctcgacatcggagccgcgatcattaccgcccgccagtccgggcttctggtc
actgggggcggtcatgccatggcagccggcttttccctgaccgcagacaatgccacggtc
tttcacgaatttctggacgccacattatcagaggcccgtgcgctccctgtacaggaagcg
ctccgcatagacggacttctgaccttgcgcggcgcctcgctcgaagtcgcttcgcaactg
gcacgtttggcaccttttggccccggaaatgaagagccggttctggcgatcagcaatgtc
cgatgcgtcaaaagcgatcgcatcggcaaggatggcaataccctgcgcctgatgttccaa
ggcgaagatggcggggcacgcctgaaggcactggtcttccgcgcgggcgacaagccctac
gtctctttgcttgaagatcgtacaatgccgctcctgcacctggccggacatctgagggtc
gaaacctggcaggaacgacaaaatctaacttttttcatttctgacgtttcaggtgcttga
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