Gluconobacter oxydans H24: B932_1713
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Entry
B932_1713 CDS
T02348
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
goh
Gluconobacter oxydans H24
Pathway
goh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
goh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B932_1713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goh03019
]
B932_1713
03009 Ribosome biogenesis [BR:
goh03009
]
B932_1713
Enzymes [BR:
goh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B932_1713
Messenger RNA biogenesis [BR:
goh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B932_1713
Ribosome biogenesis [BR:
goh03009
]
Prokaryotic type
rRNA helicases
B932_1713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFW01288
LinkDB
All DBs
Position
1738118..1740007
Genome browser
AA seq
629 aa
AA seq
DB search
MRGSLYAAASQPPLLAVGVTFAECSSNMPFPDTHPALGRALTARGYEQPTPVQEAVLQPG
LEDRDLLVSAQTGSGKTVAFGLAIAPTLLGEADRLPPSPQPLALVIAPTRELALQVQSEL
EWLYAETGARIASCIGGTDARREARDLNRGAHIVVGTPGRLCDHQSRGSLDLSGLRCVVL
DEADEMLDMGFRDELEQLLDASPAERRTLLFSATIAREIASLAKRFQKDAKRIDTVTGAK
QHSDITYRCVVTAPQEIERSLVNVLRFYESPTAMVFCNTRMMVGQVQAALLERGFASVAI
SGEMGQNERSRAIESLRSGQARVCVATDVAARGIDVPALNLVIHASIPTASETLLHRSGR
TGRAGRKGTSVLMVPMNQRRRAERLLAMARVNAEWEAVPTADAIAAQDTQRLLEDPILAN
ASEETTDELVLKLAETYDAKKLAAALVQMYRARLPQVEQIRPMSVEAPSSRGERGERAPR
EERVVSGQWFKMGVGRTERADPKWLIPLICRLGNVQKRDIGSIRIEQDQTYFQITDESVE
RFKSCVAGAEPDEVTIEPSAEPAGGGYGSRGRNPGEGKRFGRPGGGGGFKGGPRSGGGGG
AYKGRGGSGFSRSKAGGPTGEGTSRKRRS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcggaagtctttatgcagcggcatcccagccgccgcttcttgccgtcggcgtgacg
tttgccgagtgttcatcaaatatgcctttccccgatactcaccctgcccttggacgcgcc
ctgacggcgcgcggctacgaacagccaactcccgttcaggaagccgttctgcagccaggg
ctggaggatcgtgatcttctggtttccgcccaaacgggctcaggcaagaccgtagccttt
ggtctggccattgcgccgacgctgctgggcgaggccgatcgcctcccgccgtcgccgcag
ccgcttgctctggttattgccccgacgcgtgaactggcccttcaggtccagtccgaactt
gagtggctctatgccgaaaccggtgcccgcattgcgagctgcattggtggcacggacgcc
cggcgtgaagcccgcgatctcaaccgtggcgcccatatcgtcgttgggacgccgggtcgc
ctgtgtgatcatcagtcccgtggctcccttgacctgtccggtctgcgctgcgtcgtgctc
gacgaagctgacgaaatgctggacatgggcttccgtgacgagctggaacagcttctggat
gcgtctccggccgagcgccgcacgctgctgttctccgccacgatcgcccgcgaaattgcg
tccctggccaagcgtttccagaaagatgccaagcgcattgatacggtaacgggtgcgaag
cagcattccgatatcacctatcgctgcgtcgtaacggctccgcaggaaatcgagcgttcc
ctcgtgaacgttctgcgtttctacgagagcccgacggccatggtgttctgcaacacccgt
atgatggttggtcaggtgcaggcagctcttctggagcgtgggttcgcctctgtcgccatt
tccggtgaaatgggtcagaacgagcgtagccgtgcgatcgagagcctgcgctccggtcag
gcccgtgtctgtgttgcgaccgacgttgccgcacgtggcattgacgttccggcgctgaac
ctcgtgattcacgccagcatcccgacggcttctgaaacactgctgcaccgttccggccgg
accggtcgtgcgggccgcaagggcaccagtgtgctcatggtgccgatgaaccagcgtcgc
cgtgccgagcgtctgctggctatggcgcgcgtgaatgcagagtgggaagctgttccgacc
gctgatgccattgctgctcaggatacgcagcgcctgctcgaagatccgattctcgccaac
gcctcggaagagacgacggacgagctggttctgaagctggctgaaacctacgacgccaag
aagctcgcagcagctcttgtgcagatgtatcgtgcccgtcttccgcaggtcgagcagatc
cgtccgatgtctgttgaagcgccgagcagccgtggcgagcgtggagaacgtgctccgcgt
gaagagcgcgttgtttccgggcagtggttcaagatgggcgttggccgcaccgagcgcgct
gatccgaagtggctgatcccgctgatctgccgtctgggcaatgttcagaagcgtgacatt
ggcagcatccgcatcgaacaggatcagacctacttccagattacggatgagagcgtcgag
cgcttcaagtcctgtgttgctggtgccgagcccgatgaagtgacgatcgagccatctgcc
gagcctgctggcggcggctatggttcgcgtggtcgcaatccaggcgaaggcaagcgcttt
ggtcgcccgggtggcggtggcggcttcaagggcggtccacgctctggcggcggcggtggc
gcatacaagggccgtggtggctctggcttcagccgctccaaagctggtggcccgaccgga
gaaggcacgagccgcaagcgccgttcctga
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