Gluconobacter oxydans H24: B932_2195
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Entry
B932_2195 CDS
T02348
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
goh
Gluconobacter oxydans H24
Pathway
goh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
goh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B932_2195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goh03019
]
B932_2195
Enzymes [BR:
goh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B932_2195
Messenger RNA biogenesis [BR:
goh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B932_2195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
UTP25
AAA_22
Helicase_C_2
AAA_19
DUF5645
Motif
Other DBs
NCBI-ProteinID:
AFW01757
LinkDB
All DBs
Position
2204348..2205655
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AA seq
435 aa
AA seq
DB search
MTSFAELNLAEPIQKALAEEGYTTPTPIQAGAIPYLLEGRDLLGLAQTGTGKTAAFALPI
LDYLLRNRRPPAPKTVRVLVLAPTRELASQIDESFGAYARHMKLSHAVVFGGVGQGRQIE
ATRRGVDVLVAAPGRLLDLVGQGYIDLSALEVLVLDEADRMLDMGFVRDIRRIMALLPAR
RQTVLFSATMPQSISDLAHSLLSNPATVQVTPESSTVDRIRQAVMFVESEKKKDATLMLV
ESSNVVRAVVFTLMKHEANKVAEFLNKNGITAEAIHGNKSQGARERAMSGFRTGTVKVLV
ATDIAARGIDVDDVSHVFNYDLPNVPESYVHRIGRTARAGRDGWAVSLCDAEQRAWLKDI
EKKIDKAIPVVTDHPYHSDAAQNSTMRPPVLGGGRGGGGQRGGGNGGGGRRRPGPPPSAR
GSAGRRGGARSAGHR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtttcgcagagctcaatcttgccgaaccaatccagaaggcacttgccgaagaa
ggatatacgacaccgacccccattcaggccggtgcaattccttacctgcttgaagggcgt
gatcttcttggtctggcgcagacaggtaccggaaagacagcggctttcgccctgccgatc
ctcgactatcttctgcgcaaccgtcgccctccggcaccgaagacggttcgtgtgcttgtg
ctggctccgacacgtgagctcgcttcccagattgacgaaagcttcggggcttatgcccgt
cacatgaagctgtctcatgccgttgtcttcggtggcgtggggcaggggcgtcagattgaa
gcgacgcgccgtggcgttgatgtgctggttgcagcgccgggccgactgctggacttggtg
gggcagggttatattgacctgtcggccctcgaagtgctggtgcttgatgaagccgaccgg
atgctggacatgggcttcgtccgtgacatccgtcgcatcatggcgcttctgccggcacgt
cgtcagacggttctgttctccgcaacgatgccgcagtccatcagtgatctggcgcattcc
ctgctgagcaatcctgcgacggttcaggttacgcctgagtccagcacggtggatcggatc
cggcaggctgtgatgttcgttgagtcggagaagaagaaagacgcgacattgatgctcgtt
gagagctcaaatgttgtgcgcgccgtcgttttcacgctgatgaagcatgaagcgaacaag
gttgcggagttccttaacaagaacggtattaccgctgaggccattcacggtaacaagtca
cagggtgcccgtgagcgtgccatgtcgggtttccgtaccggcacggtcaaggtgcttgtt
gctacggatattgctgcacgtggtatcgacgttgacgacgtatcccacgtctttaactac
gatctgccgaatgttcctgaatcctacgttcatcgtattggccgtacggctcgtgcagga
cgtgacggatgggccgtgtctctgtgcgatgccgaacagcgtgcgtggctgaaggatatt
gaaaagaagatcgacaaggccattccggtcgtgaccgatcatccgtatcactctgatgca
gcccagaattccacaatgcggccacccgttctcggtggtggacgtggtggtggcgggcag
cgcggcggtggaaatggtggcggtggccgtcgtcgtccaggaccgcctccatcggctcgt
ggatccgctggccgtcgtggtggtgcacggtctgccggacaccggtga
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