Entry |
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Name |
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KO |
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Organism |
goh Gluconobacter oxydans H24
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:goh00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B932_2446
03430 Mismatch repair
B932_2446
03440 Homologous recombination
B932_2446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:goh03032]
B932_2446
03400 DNA repair and recombination proteins [BR:goh03400]
B932_2446
Enzymes [BR:goh01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B932_2446
DNA replication proteins [BR:goh03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B932_2446
DNA repair and recombination proteins [BR:goh03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B932_2446
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2440429..2443851
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AA seq |
1140 aa
MSHADFVHLRNHSAYSLSQGAIRISDLVGLAAKNAMPAVALTDSGNLFGALEFSLYCRNA
GVQPIVGCQLSLPSRSTKPGAPSEPLVVLARNETGLANLQILSSHGFLNGDPADPTVAVD
VLCQHADGLFLLTGGNRGPINRLIYDEQKDEAAELLRRLAEAFPGNVAVELNRLGENGER
EIESVLIPLADKLDIPLVATNECFFPTAQMHEAHDALICIAQGRTMAEADRWHVSPQSWF
KTPAEMRELFKDLPEACDNTLIIAQKCAVAACTRKPLLPICPKVREGSTEEETLRAMAWE
GLEKRLEAIDADEDKRKIYSERLQTELDIIAKMGFPGYFLIVADFIQWAKAHDIPVGPGR
GSGAGSLAAYALTITDIDPLPFGLLFERFLNPERVSMPDFDIDFCQDRRDEVIRYVREEY
GGSRVAQIITFGKLQAKAAVRDVGRVLGLPYGMVNRVAELIPNNPAKPVTLAQAIEGEPR
LQEMRDSDEALKRLLEIALQLEGLYRHASTHAAGVVIGDRELVELVPLYRDPKSDMLVTQ
YNMKFVEQAGLVKFDFLGLTTLTILKRGLDFLEEQGVIVDLSRIPLDDAKTFDMLAKGDT
AGVFQFEGAGMRDMLKQMAASRLEDLIAGVSLYRPGPMANIPDYCRRKHGEPWEPPHEEI
RDILEETYGIMVYQEQVMQIAQKMAGYSLGGADLLRRAMGKKIASEMEKQREIFTEGATA
RGIPKDKAVEVFDLMARFADYGFNKSHAAAYALVSYQTAWMKANYPVAFLAGCMSLAREK
TDKLAALCQEARRMKIPVLPVDINKSMADFSIETLEDGRQGIRYALSAIKRVGAAAMESV
VAARGTKPFQDLTDFAERCDPKSLNKIQIESLAKSGAFDSLLKERHIVFSSADILLRRAQ
SRAQEQQMGQTGLFGGSGQDREILRLNEGRPWPDFERLSLEASAIGFHMSAHPLDAYRTV
LRKLGVTPSNALENAAKTGTMRVKIAGCVVDKKERPTRTGKKMAWVNLSDSGGGCEVTLF
AETLTSCRELLVAGQAILVQAELKLDGDALRITAQSVMDLETAAAAERSEMRVWLKQMDA
LPTLSEMLADMRGGHGKVVFLPSLEETRDVEIALPGTYRVTPRLAERLRTVRGVEKAEQR |
NT seq |
3423 nt +upstreamnt +downstreamnt
atgtctcatgccgatttcgttcatcttcgtaatcattccgcgtattccctgagccaaggg
gccatccgcatttccgatctcgtcggtttggcggccaaaaatgctatgcctgccgtcgcc
ctgacggatagtggcaacctttttggagcgctcgaattttctctgtactgtcgcaatgca
ggtgttcagcccattgttggctgccagctttctcttccgtcgcgcagtacaaaaccgggt
gcgccctccgagccactggtggtccttgctcggaacgagacaggactcgccaatcttcag
atcctctcctcgcacgggtttctaaacggcgatcctgctgatccaactgttgccgtagac
gtgctgtgccaacatgcggacggcctgtttctgctgacgggcggtaatcgggggcccatc
aaccggttaatttatgatgagcagaaagacgaggcggcggaactgcttcgtcgactggct
gaggcattccccggcaatgtcgcagttgaactgaaccgtttgggcgagaacggggagcgg
gaaatcgagagcgtcctgattcctctggcggataagctcgacattccacttgttgcgacc
aatgaatgcttcttcccgacggcacagatgcatgaagcgcatgatgcgctgatctgtatc
gcgcagggacggacaatggcagaggctgatcgctggcatgtctcgccacagagttggttc
aaaacgcccgctgaaatgcgtgagcttttcaaagatctgccggaggcctgcgacaatacg
ctcatcattgcgcagaaatgcgccgttgcagcctgcactcgtaagcctctgctgccaatt
tgccccaaggtccgcgagggctcgactgaggaagaaacacttcgagccatggcttgggaa
gggctggaaaagcggcttgaggcgattgatgcggatgaagacaaacgcaaaatctactcc
gagcgcctccagacggagctcgacatcatcgcgaagatgggtttccccggttacttcctg
atcgttgctgacttcattcagtgggccaaggcgcatgatattcccgtagggccgggacgt
ggatcaggtgctggctcgctggcggcttacgccctgaccattaccgacattgatccgctt
ccgtttgggctcctgttcgagcgctttctgaacccggaacgtgtgtcgatgcctgatttc
gatatcgatttctgtcaggatcggcgtgatgaagtcatccgatatgtccgtgaggaatat
ggcggaagtcgcgtagcgcagatcatcacgttcggaaagcttcaagccaaggccgctgtc
agagacgtcggacgtgtgctgggtttgccatatggcatggttaatcgggttgccgagctt
atcccgaacaatcctgccaagcccgttactcttgcacaggcgatcgaaggcgagcctcgc
cttcaggaaatgcgggacagcgacgaggctctgaagcgtcttctggaaatcgctcttcag
cttgagggtctttatcgccacgcgtccactcatgccgcaggtgtggtgattggagaccgt
gagctggtcgaacttgtgccgctctatcgtgaccccaagagcgacatgcttgttactcag
tacaacatgaaatttgtggagcaggccggtcttgtgaagttcgacttccttggcctgacg
acactgacgattctaaagagaggtctggatttccttgaagaacaaggagttatcgtagat
ctctcacgtattcctttagatgacgccaaaaccttcgacatgcttgccaagggcgatacg
gccggcgtgttccagttcgaaggtgctggcatgcgggatatgctcaaacagatggctgcc
agccgtctggaagatctgatcgcgggggtatccctgtatcgtccgggaccaatggccaac
attccggattactgccgtcgcaagcatggtgagccgtgggagccgccgcacgaggaaatc
cgtgacatccttgaagagacctatggcatcatggtctatcaggaacaggtcatgcagatt
gcccagaagatggcgggttacagtctgggtggtgctgatcttctgagacgtgccatgggt
aaaaagatcgcgtctgaaatggagaaacagcgcgagatctttactgaaggcgcgacggcc
agaggaatacctaaagacaaagccgtcgaagtctttgatcttatggctcgttttgctgat
tacggcttcaacaagtcccatgctgcggcctatgcgctggtctcgtatcagacagcctgg
atgaaggcgaactatcccgttgccttccttgccggctgtatgtcattggcccgggaaaag
actgacaagctggctgctctctgccaggaagccaggcggatgaaaattcctgtccttcct
gtcgatatcaacaagtcgatggccgacttctccatcgagacacttgaagacggtcgacag
gggatccgatacgcactgtctgcgatcaagcgcgtcggtgcagccgcgatggagtccgtc
gttgctgcccgggggaccaaacctttccaggatcttacggatttcgcagaacggtgtgat
ccaaagagtctgaataagatacagatagaaagtcttgcaaaatcaggagctttcgacagc
cttcttaaggaacgtcatattgttttttctagtgctgacatcctgttacgtcgtgcgcag
tcgcgcgcccaggaacagcagatgggccagactggactgttcggcggaagcggtcaggat
cgcgaaattctaagactgaatgaagggcgtccttggcccgattttgaacgcctgtcgctt
gaggcatccgctatcggcttccacatgagtgcccatccgctggatgcctatcgcacggtt
ctcagaaagctgggtgttacgccgtctaacgcgctagaaaatgctgcaaaaacagggact
atgcgcgtaaagatcgcaggatgcgttgttgataagaaagagcgtccgacgcgaaccggc
aagaagatggcatgggtcaatctttcggatagtggtggtggctgtgaggtcacgcttttc
gcggaaaccctgacatcatgtcgtgagcttctggttgctggacaggccattcttgttcag
gcggaactcaaacttgatggagatgccctgcggatcacggcgcagagcgttatggatctt
gaaacggccgccgctgctgagcgatccgaaatgcgtgtatggctgaagcagatggatgca
cttccaacgctttctgaaatgcttgcagacatgcggggaggccatggaaaggtcgtgttt
ctgccttctcttgaagaaacgagagatgtggaaattgcgcttcctggcacatatcgcgtg
acaccccgtcttgcggaacgtctgcggaccgttcgtggtgtcgagaaggctgaacagcgc
tga |