Gluconobacter oxydans H24: B932_2446
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Entry
B932_2446 CDS
T02348
Name
(GenBank) DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
goh
Gluconobacter oxydans H24
Pathway
goh03030
DNA replication
goh03430
Mismatch repair
goh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
goh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B932_2446
03430 Mismatch repair
B932_2446
03440 Homologous recombination
B932_2446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
goh03032
]
B932_2446
03400 DNA repair and recombination proteins [BR:
goh03400
]
B932_2446
Enzymes [BR:
goh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B932_2446
DNA replication proteins [BR:
goh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B932_2446
DNA repair and recombination proteins [BR:
goh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B932_2446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AFW02000
LinkDB
All DBs
Position
2440429..2443851
Genome browser
AA seq
1140 aa
AA seq
DB search
MSHADFVHLRNHSAYSLSQGAIRISDLVGLAAKNAMPAVALTDSGNLFGALEFSLYCRNA
GVQPIVGCQLSLPSRSTKPGAPSEPLVVLARNETGLANLQILSSHGFLNGDPADPTVAVD
VLCQHADGLFLLTGGNRGPINRLIYDEQKDEAAELLRRLAEAFPGNVAVELNRLGENGER
EIESVLIPLADKLDIPLVATNECFFPTAQMHEAHDALICIAQGRTMAEADRWHVSPQSWF
KTPAEMRELFKDLPEACDNTLIIAQKCAVAACTRKPLLPICPKVREGSTEEETLRAMAWE
GLEKRLEAIDADEDKRKIYSERLQTELDIIAKMGFPGYFLIVADFIQWAKAHDIPVGPGR
GSGAGSLAAYALTITDIDPLPFGLLFERFLNPERVSMPDFDIDFCQDRRDEVIRYVREEY
GGSRVAQIITFGKLQAKAAVRDVGRVLGLPYGMVNRVAELIPNNPAKPVTLAQAIEGEPR
LQEMRDSDEALKRLLEIALQLEGLYRHASTHAAGVVIGDRELVELVPLYRDPKSDMLVTQ
YNMKFVEQAGLVKFDFLGLTTLTILKRGLDFLEEQGVIVDLSRIPLDDAKTFDMLAKGDT
AGVFQFEGAGMRDMLKQMAASRLEDLIAGVSLYRPGPMANIPDYCRRKHGEPWEPPHEEI
RDILEETYGIMVYQEQVMQIAQKMAGYSLGGADLLRRAMGKKIASEMEKQREIFTEGATA
RGIPKDKAVEVFDLMARFADYGFNKSHAAAYALVSYQTAWMKANYPVAFLAGCMSLAREK
TDKLAALCQEARRMKIPVLPVDINKSMADFSIETLEDGRQGIRYALSAIKRVGAAAMESV
VAARGTKPFQDLTDFAERCDPKSLNKIQIESLAKSGAFDSLLKERHIVFSSADILLRRAQ
SRAQEQQMGQTGLFGGSGQDREILRLNEGRPWPDFERLSLEASAIGFHMSAHPLDAYRTV
LRKLGVTPSNALENAAKTGTMRVKIAGCVVDKKERPTRTGKKMAWVNLSDSGGGCEVTLF
AETLTSCRELLVAGQAILVQAELKLDGDALRITAQSVMDLETAAAAERSEMRVWLKQMDA
LPTLSEMLADMRGGHGKVVFLPSLEETRDVEIALPGTYRVTPRLAERLRTVRGVEKAEQR
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatgccgatttcgttcatcttcgtaatcattccgcgtattccctgagccaaggg
gccatccgcatttccgatctcgtcggtttggcggccaaaaatgctatgcctgccgtcgcc
ctgacggatagtggcaacctttttggagcgctcgaattttctctgtactgtcgcaatgca
ggtgttcagcccattgttggctgccagctttctcttccgtcgcgcagtacaaaaccgggt
gcgccctccgagccactggtggtccttgctcggaacgagacaggactcgccaatcttcag
atcctctcctcgcacgggtttctaaacggcgatcctgctgatccaactgttgccgtagac
gtgctgtgccaacatgcggacggcctgtttctgctgacgggcggtaatcgggggcccatc
aaccggttaatttatgatgagcagaaagacgaggcggcggaactgcttcgtcgactggct
gaggcattccccggcaatgtcgcagttgaactgaaccgtttgggcgagaacggggagcgg
gaaatcgagagcgtcctgattcctctggcggataagctcgacattccacttgttgcgacc
aatgaatgcttcttcccgacggcacagatgcatgaagcgcatgatgcgctgatctgtatc
gcgcagggacggacaatggcagaggctgatcgctggcatgtctcgccacagagttggttc
aaaacgcccgctgaaatgcgtgagcttttcaaagatctgccggaggcctgcgacaatacg
ctcatcattgcgcagaaatgcgccgttgcagcctgcactcgtaagcctctgctgccaatt
tgccccaaggtccgcgagggctcgactgaggaagaaacacttcgagccatggcttgggaa
gggctggaaaagcggcttgaggcgattgatgcggatgaagacaaacgcaaaatctactcc
gagcgcctccagacggagctcgacatcatcgcgaagatgggtttccccggttacttcctg
atcgttgctgacttcattcagtgggccaaggcgcatgatattcccgtagggccgggacgt
ggatcaggtgctggctcgctggcggcttacgccctgaccattaccgacattgatccgctt
ccgtttgggctcctgttcgagcgctttctgaacccggaacgtgtgtcgatgcctgatttc
gatatcgatttctgtcaggatcggcgtgatgaagtcatccgatatgtccgtgaggaatat
ggcggaagtcgcgtagcgcagatcatcacgttcggaaagcttcaagccaaggccgctgtc
agagacgtcggacgtgtgctgggtttgccatatggcatggttaatcgggttgccgagctt
atcccgaacaatcctgccaagcccgttactcttgcacaggcgatcgaaggcgagcctcgc
cttcaggaaatgcgggacagcgacgaggctctgaagcgtcttctggaaatcgctcttcag
cttgagggtctttatcgccacgcgtccactcatgccgcaggtgtggtgattggagaccgt
gagctggtcgaacttgtgccgctctatcgtgaccccaagagcgacatgcttgttactcag
tacaacatgaaatttgtggagcaggccggtcttgtgaagttcgacttccttggcctgacg
acactgacgattctaaagagaggtctggatttccttgaagaacaaggagttatcgtagat
ctctcacgtattcctttagatgacgccaaaaccttcgacatgcttgccaagggcgatacg
gccggcgtgttccagttcgaaggtgctggcatgcgggatatgctcaaacagatggctgcc
agccgtctggaagatctgatcgcgggggtatccctgtatcgtccgggaccaatggccaac
attccggattactgccgtcgcaagcatggtgagccgtgggagccgccgcacgaggaaatc
cgtgacatccttgaagagacctatggcatcatggtctatcaggaacaggtcatgcagatt
gcccagaagatggcgggttacagtctgggtggtgctgatcttctgagacgtgccatgggt
aaaaagatcgcgtctgaaatggagaaacagcgcgagatctttactgaaggcgcgacggcc
agaggaatacctaaagacaaagccgtcgaagtctttgatcttatggctcgttttgctgat
tacggcttcaacaagtcccatgctgcggcctatgcgctggtctcgtatcagacagcctgg
atgaaggcgaactatcccgttgccttccttgccggctgtatgtcattggcccgggaaaag
actgacaagctggctgctctctgccaggaagccaggcggatgaaaattcctgtccttcct
gtcgatatcaacaagtcgatggccgacttctccatcgagacacttgaagacggtcgacag
gggatccgatacgcactgtctgcgatcaagcgcgtcggtgcagccgcgatggagtccgtc
gttgctgcccgggggaccaaacctttccaggatcttacggatttcgcagaacggtgtgat
ccaaagagtctgaataagatacagatagaaagtcttgcaaaatcaggagctttcgacagc
cttcttaaggaacgtcatattgttttttctagtgctgacatcctgttacgtcgtgcgcag
tcgcgcgcccaggaacagcagatgggccagactggactgttcggcggaagcggtcaggat
cgcgaaattctaagactgaatgaagggcgtccttggcccgattttgaacgcctgtcgctt
gaggcatccgctatcggcttccacatgagtgcccatccgctggatgcctatcgcacggtt
ctcagaaagctgggtgttacgccgtctaacgcgctagaaaatgctgcaaaaacagggact
atgcgcgtaaagatcgcaggatgcgttgttgataagaaagagcgtccgacgcgaaccggc
aagaagatggcatgggtcaatctttcggatagtggtggtggctgtgaggtcacgcttttc
gcggaaaccctgacatcatgtcgtgagcttctggttgctggacaggccattcttgttcag
gcggaactcaaacttgatggagatgccctgcggatcacggcgcagagcgttatggatctt
gaaacggccgccgctgctgagcgatccgaaatgcgtgtatggctgaagcagatggatgca
cttccaacgctttctgaaatgcttgcagacatgcggggaggccatggaaaggtcgtgttt
ctgccttctcttgaagaaacgagagatgtggaaattgcgcttcctggcacatatcgcgtg
acaccccgtcttgcggaacgtctgcggaccgttcgtggtgtcgagaaggctgaacagcgc
tga
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