Gluconobacter oxydans H24: B932_2558
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Entry
B932_2558 CDS
T02348
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
goh
Gluconobacter oxydans H24
Pathway
goh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
goh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B932_2558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goh03019
]
B932_2558
03400 DNA repair and recombination proteins [BR:
goh03400
]
B932_2558
Enzymes [BR:
goh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B932_2558
Messenger RNA biogenesis [BR:
goh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B932_2558
DNA repair and recombination proteins [BR:
goh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B932_2558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
CobT
Motif
Other DBs
NCBI-ProteinID:
AFW02109
LinkDB
All DBs
Position
complement(2558706..2560556)
Genome browser
AA seq
616 aa
AA seq
DB search
MTEGSIPLAPGPGQNPEQVLADVFGFSGFRGLQGDAVETVMRGEDVLVLMPTGGGKSLCY
QVPALCRDGMGIVVSPLIALMDDQVAGLRQLGIRAAALHSELETEEREILRDDLRNHKID
ILYISPERLLQPGTANFLSKRKVSLIAIDEAHCVSAWGHEFRPEYRALASLPELFPNVPR
IALTATADPRTRDDILNVLGMPDARVLMASFHRPNLFVEARPKGGESKQLLEALESHRTG
AAIVYCGSRNKTERTATMLRGKGLTALPYHAGLSPIEKRATLMRFRSGEDMVIVATIAFG
MGIDRPDVRCVIHLDMPSSPEAYYQQIGRAGRDGEKSDTLLLYGGEDMARARHWLEQSNA
PDNEKRVMQSRLESMIALTETTGCRTQALLACFGENLSSPCGHCDNCITPVSTFDGTEAA
QKVLSAIYRTGQRLGAVQLTNVLRGKTNETIERHAYNHLSVFGIGKDQTENWWRAVVRQL
IARGAIRTHGEHGSLALQTEIARPILRGDEKILLRQDTRQSLIARTPSSNQENESLSPEE
KTVFDALRQWRLSEAREQEIPPYVIFHDSVLRDIAREHPVSHHELASIKGVGTSKLDRYG
ESVLAVIKEISATIMA
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
gtgacggagggatccatcccccttgcgcccggcccaggccagaaccctgaacaggtcctt
gcggatgtgttcgggttctccggtttccgcggtcttcagggagacgccgtagaaaccgta
atgcgaggcgaggacgttctggttctcatgcccactggtggtggaaaaagcctctgctat
caggttcccgccctatgccgtgacggtatgggcattgttgtctcccccctgattgccttg
atggacgatcaggttgcgggtctccggcagctcggtatccgtgcagcagccctccattca
gagcttgaaacggaagagcgggagatcctccgcgacgatctgcgcaaccacaagatcgac
attctgtatatttcgcctgaacggctgctccagccaggcaccgccaactttctgtcaaag
cgcaaagtgtctctcattgcgattgacgaagcacactgcgtctccgcctgggggcatgaa
ttccgccccgaatatcgcgctcttgcgtccctgccggagctctttcccaacgttccccgc
attgccctgacggccacggctgaccccagaacccgggatgatatcctgaacgttctgggc
atgcccgacgcccgggttctcatggccagctttcaccggcccaatctgtttgtggaagca
cggccgaaaggtggcgagagcaagcagcttcttgaggctctcgaaagtcaccgaaccggc
gcggccatcgtttattgcggcagcaggaacaaaaccgagcgcacggccaccatgctgcgg
gggaagggcctgacggctcttccgtatcatgcaggcctttcacccatcgagaagcgtgcg
accctcatgcgcttccgctccggggaagacatggtgatcgtcgctacgatcgcgttcggc
atggggattgaccggccagatgtacgttgcgtgatccatctggatatgccgtcttctccg
gaagcctattaccagcagattgggcgggcagggcgtgacggagaaaaatccgacacactt
ctcctgtatggcggtgaggatatggcgcgggcgcgccattggctggaacagtcaaatgca
cccgacaatgaaaaacgtgtcatgcaatcccgcctggaaagcatgatcgcccttacggaa
accacaggatgcagaacgcaggcacttctggcctgtttcggcgagaacctgtcatctccc
tgcggacattgtgacaactgcatcacgcccgtctccacgtttgacggcacagaggcagcc
cagaaagttctttccgcgatctacaggaccggccaaaggctgggcgccgtgcaactgacg
aatgttttgcggggcaagacgaacgaaacaatcgaacgccatgcctataaccatttatcc
gtgttcgggattggtaaggatcagacggaaaactggtggcgagcggttgtcaggcaactg
attgcccgaggcgccatccggacccatggcgagcacggcagcctggcccttcagacagaa
atcgcacggccgatcctgcgcggggacgaaaaaatattgctccgtcaggatacgcgccag
agcctgattgcccgcacgccgtcgagcaatcaggaaaacgagagcctgtctcccgaagaa
aaaaccgtgttcgatgcgctgcgtcagtggcggctttcagaagcccgggaacaggaaatc
ccgccttacgtcattttccacgattctgtactgcgtgacatcgcccgggagcatccggtc
agccatcacgagcttgccagcatcaagggcgtgggaacgtccaagctcgaccggtatggc
gaatcggttctggcggtcatcaaggaaatctcggccacgatcatggcctga
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