Entry |
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Name |
(GenBank) exonuclease SbcC
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KO |
K03546 | DNA repair protein SbcC/Rad50 |
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Organism |
goh Gluconobacter oxydans H24
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Brite |
KEGG Orthology (KO) [BR:goh00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:goh03400]
B932_2802
DNA repair and recombination proteins [BR:goh03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B932_2802
Archaeal homologous recombinant proteins
B932_2802
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2800688..2804395
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AA seq |
1235 aa
MQILAIRGRNLASLAGSFEVSFSTGVLADAGIFAITGPTGAGKSTLLDAISLALFDTIPR
LESAPRTGQITQDELRPHDPRAILRHGSGRGFAELDFIGRDGRSYRSRWEVRRARDRAEG
TLQASTLDLECLDTGERLGGKKTETKAEILRLIGLNAQQFGRAVVLAQGEFEAFIKADGD
ERAQLLEKLTGADIYSRVGRLAFEKARDVRAGYDSLERQIAAMNGLDSEARKLLEAERQA
AQAFHDEKLAIYTQLQDARNWHDRLADLKFKRDEAIHGCEVARQACESAAPRLAALKRHK
QALTHLGAWERLRDTEERVRQAEAAALQAQQTEQNATDALIIAENGLETAQQALNAVKCS
QRDASPDIQAARAVDMELTHVFSGLELSEKNLQNQIDKSKNLQKILTEIIQAVRESQFKK
NELSAWLDEKSELTKLIPFEAELMSDLKGHKRLLEQLSGLADEERQARLQYTEVAIKAEH
ARVEFDDAARALQSAEGTTARAEANAPHPEKSERLASGIRALENLQRKNQEVQRLHGDLT
AAEAAYGKTVEDIQRLTTEQTHYSTELAQLDKQLPILSAVLKEAKRSEEHCRNTTSDAAA
LMRAALVDGEACPVCGATKHHLDALDAILDGAVEKAQRRTTEATTALEAARERVTVLRTW
GDSAQAQLSRLHEQQNNQGNAKEAYRAAWQVGVTQLALDCKACGLSNDQSGPELADEAET
CLTALGQEQAAFNAKMLELDTVRKAERVARAHCDMARQSHEAVEGEYRGTESRLKDAEHK
LLQQEEERKRLEELLDARLSRTVAWRDLSGDPAVWLSENLSEWRSKNEAHIQTERDWPSL
TAKHARAESDVYAAREVLADIQVEWQTKHDVHQALVRKRSGLLDGQSVESVIEKIDGAVR
EAEEALQKALDIKNTASECAVGARTRCEGAVKLLEGVQKELFQLSESFESRLMLEGFSRA
DISEAQARGPEYAAAEEKALSELNKAYSDACATLKPRESDYAQHEASRQAAFDIADLEQQ
LVLAKTTVADAKTALTRLEARVLQDDETRLQTAELRAQLDAKRADGHVWEQLGDILGDAQ
GKRFRNFAQSLTLDHLLDFANERLADLKPRYSLQRAPAGEMLIEVIDNNMGGLVRGLQNL
SGGERFLVSLALALGLSEMSTGRGIRIESLFIDEGFGALDSASLGQAIAVLEHLQAQGRR
VGVISHVEELKERIPVKVEVTPVSGGKSQIAIVVD |
NT seq |
3708 nt +upstreamnt +downstreamnt
atgcagatccttgcaatccgtggcaggaatctcgccagtctcgcaggttcattcgaagtc
agtttcagcacgggggttctggcagacgccggtatctttgcgattaccggtccaacgggc
gctggaaaatccacgcttctggacgccataagtctggcccttttcgataccatcccccgt
ctggaaagtgctcccagaacaggtcagatcacgcaggatgagctccgcccgcacgacccc
cgggctattttgcggcatggctctggccgcggtttcgcagaactcgattttatcggacga
gacggtcgaagctatcgcagccgttgggaagtccgccgtgcccgggaccgtgcggagggt
acactgcaagccagtacgctcgacctggaatgtctcgatacgggtgagcggctgggagga
aaaaagaccgaaaccaaagcagaaatccttcggcttattggtctgaatgctcagcagttt
ggccgtgctgttgttttggcacagggagagttcgaggctttcatcaaggctgacggcgat
gaacgggcacaactgctcgaaaaactgacaggtgctgatatttacagccgtgttggcagg
ctcgcctttgagaaagcccgtgatgtccgcgcgggatacgatagtctcgaaagacagatc
gcagccatgaatggcctcgacagcgaagcgcgaaaactgctggaagcagaacgacaggct
gcacaggcgtttcatgacgagaaactcgccatatatacgcagcttcaggatgcccgaaac
tggcatgacagactggccgatctgaaatttaagcgtgacgaagcgattcatggctgcgaa
gtcgcgcgacaggcttgcgagagtgccgctcctcgtctcgctgccctgaaacgccacaag
caggctctgactcatctgggagcctgggaacgattaagggacaccgaagaaagagttcgt
caggctgaagctgctgcgcttcaagcccagcagaccgagcagaacgccaccgatgcgctg
atcatcgctgaaaatgggcttgaaactgcccagcaagctctcaatgctgtcaaatgttcg
cagcgggacgcatctcccgatattcaggctgctcgtgcagtggatatggaactgacgcat
gtcttcagtggcctcgaattatcagagaaaaatcttcaaaatcaaatagataaatctaaa
aacttacagaaaatattaactgaaatcattcaggcggttcgtgagtcgcaatttaagaaa
aacgaactttcagcatggttggatgaaaagtcagagcttacgaagctgataccctttgaa
gctgaactcatgtctgacctcaaggggcataagcggcttctcgaacagttgtcagggctc
gcggatgaagagcgacaggctcgccttcagtatacggaagtggcgataaaagctgagcat
gccagggttgagtttgatgatgcggctcgtgctctacaatctgcggaaggcactacagcg
cgggcggaagcgaacgcgccgcaccctgaaaaatccgaacgcctcgcctctggcattcgc
gcgctggagaaccttcaaaggaaaaatcaggaagttcagcgtcttcatggagatctgacg
gcggctgaagcagcttatggcaagacagttgaggacattcagcgtctgactacagagcag
acccattacagcacggaacttgctcagctcgataaacagctcccgatcctgtcagccgtt
ttaaaagaggccaagcgttcggaagagcattgtcgtaatacgactagcgatgcggcggcc
ctgatgcgggccgcgttggttgatggagaggcgtgcccagtctgcggggccaccaagcat
catcttgacgcgctggacgccattctggatggagccgttgaaaaagcccagagaaggacc
accgaggctaccactgctctcgaagctgcacgggaacgcgttacggttctgagaacctgg
ggggatagtgctcaggcgcaactctcccgactgcatgagcaacaaaataaccaaggcaac
gcaaaagaggcttatcgggcggcgtggcaggtgggcgtgacccagttggcgttagactgt
aaggcctgtggtctgagcaacgatcagtcagggccagagctggccgatgaagcggagaca
tgcctcacggctcttgggcaggagcaggccgcgttcaacgcaaaaatgcttgagcttgat
acggtcaggaaagcggagcgtgtcgctcgggcacactgcgatatggcgcgtcagtctcat
gaagcggtcgagggggagtaccggggaacagagagcagattgaaagatgccgagcataag
cttcttcagcaggaagaagagcgaaagcgtctggaagaactgcttgatgccagactatcc
aggacagttgcgtggcgcgacctttcaggcgatccggcagtttggctctctgaaaatctt
tctgagtggcgttccaaaaacgaagcgcatatccaaacggaaagagattggcccagccta
accgccaaacatgcccgtgctgagagtgacgtatatgcagcaagagaagttcttgctgac
atacaagtcgaatggcagacgaaacacgacgtccatcaggcgctagtgcgaaaacgctcg
gggctgcttgatgggcagtctgtggagagcgtgattgagaagattgacggggctgttcga
gaggcagaagaggctttgcaaaaagccctggacatcaaaaataccgcttccgaatgtgct
gtgggagcaagaacacgctgtgaaggggctgtgaagcttttggaaggagttcaaaaagag
ctcttccaactgtctgaaagttttgagtccaggctgatgcttgaggggttcagtcgagcg
gacatcagtgaggcacaggcgcgtggtccggagtatgccgccgctgaagaaaaggcactc
tctgaactgaataaggcttacagtgacgcttgtgctactctgaagccccgagaaagcgac
tatgcccagcacgaagccagcaggcaggcggcttttgacattgccgatctggagcagcag
cttgtgttggcgaaaacaaccgtcgcggatgccaagaccgcgctgacgcgactggaagca
agggtcctgcaagacgacgaaacgcgtttgcagacagccgaactcagggcgcaactcgat
gcaaaacgcgcagatggtcatgtctgggaacagttgggagatatactgggcgatgctcag
ggtaagcggttccgtaatttcgcacagagcctgacgcttgatcatctcctcgatttcgcc
aacgaacgtcttgcggatctcaagccccgttacagcctccagcgtgcccctgcgggagaa
atgctgattgaggttattgataataacatgggcggtcttgtgcgtggactgcaaaacctc
tcggggggtgaacgctttcttgtcagtcttgcactcgcattagggctttcggaaatgtcc
acagggcgtggcatccggatcgagagcctgtttattgatgaggggttcggtgcactggac
tctgcaagccttgggcaggcgattgccgtgctcgaacatctgcaagcacaagggcgccgt
gttggcgtgatcagtcacgtggaagaactgaaagagcgcattcccgtaaaggtcgaagta
acgccagtttccgggggaaaaagccagatcgcgattgtcgtcgattaa |