Gordonia otitidis: LK459_01190
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Entry
LK459_01190 CDS
T07915
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
goi
Gordonia otitidis
Pathway
goi00300
Lysine biosynthesis
goi00470
D-Amino acid metabolism
goi01100
Metabolic pathways
goi01110
Biosynthesis of secondary metabolites
goi01120
Microbial metabolism in diverse environments
goi01230
Biosynthesis of amino acids
Module
goi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LK459_01190 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LK459_01190 (lysA)
Enzymes [BR:
goi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LK459_01190 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UEA59551
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All DBs
Position
complement(264003..265421)
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AA seq
472 aa
AA seq
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MNAHPAGPRHAEIQAAPHLAQQPRDPAAVARIPANVFPRNAVRDESGELTIAGVGVGELA
ETFGTPLFVLDEDDFRSRCRDMMAAFGPYGRVHYASKAFLCSEVARWVEQEGLSLDVCSG
GELAIALHAGFPAERIALHGNNKSIDELAAALDAGVGHIVLDSMMEIERLDSLAGERGVV
ADVLIRVTVGVEAHTHEFIATAHEDQKFGFALSGDVAMEAVRRVFATDNLRLVGLHSHIG
SQIFDMDGFELAAHRVLGLLRDVVAEFGVDKTSQMSIVDLGGGLGISYLPDDDPLPVSDV
AETLAGIVRRESEALGLPMPTIAVEPGRAIAGPGTITLYRVGTIKDIELGGGSVRRYVSV
DGGMSDNIRTVLYQAEYDVRLVSRVSDTEPVVSRVVGKHCESGDIVIRDCWLPGDLEPGD
LIAVAATGAYCYSMSSRYNMVMRPAVVAVADGAARVILRRETLDDYLRLEVS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgcaccccgccggacctcgccacgcggagatccaggcggcaccccaccttgcg
cagcagccgcgtgaccccgccgcggtggccaggattccggcaaacgtattcccacgcaat
gctgttcgtgacgaatccggtgagctgaccatcgcgggcgtcggcgtgggcgaactggcc
gagacattcggaaccccgctgttcgtgcttgacgaggacgatttccgctctcgctgccga
gacatgatggccgccttcggcccgtacggccgggtgcactacgcgtcgaaggcgttcctg
tgcagtgaagtcgcgcgctgggttgagcaggagggcctctcactcgacgtctgctccggc
ggcgagctcgcgatcgcgctgcacgccggtttcccggccgaacgaatcgcgttgcacggc
aacaacaagagcatcgacgagctggctgcggccctcgacgccggtgtcggtcacatcgtg
ctggattcgatgatggagatcgaacgtctcgacagcctcgccggcgaacgtggcgtggtc
gccgacgttctgatccgagtgaccgtgggcgtggaagcgcacacccacgaattcatcgcc
acggcacacgaggaccagaagttcggtttcgcgctgtcgggtgacgtcgccatggaggcg
gtgcgtcgggtgttcgccaccgacaacctgcgtctcgtggggctgcacagccacatcggc
tcgcagatcttcgacatggatggcttcgaactcgcagctcatcgcgtgctcggacttctg
cgcgacgttgtcgcggagttcggtgtcgacaagacatcacagatgtcgattgtggatctc
ggtgggggactgggtatctcgtacctgcctgacgatgatccgctgcccgtctccgacgtc
gcagaaaccctggcgggcatcgtccgtcgcgagtcggaggccctcggactgccgatgccg
acgatcgcagtcgaaccgggccgtgcgatcgcaggcccgggcactatcacgctctaccgg
gtcggaacgatcaaggacatcgaactcggtggcggatcggtgcgacgctacgtctctgtc
gacggcggcatgagcgacaacatccgcacagtgctctatcaggccgaatacgacgtccgg
ttggtgtctcgggtgtccgacaccgagcctgtggtcagccgcgtcgtcggaaagcactgc
gagagcggcgacatcgtcatccgcgactgctggttacccggcgacctcgagcccggcgac
ctgatcgccgtcgcggcgacgggtgcctactgctattcgatgtcgagccggtacaacatg
gtgatgaggcccgccgttgttgcggtggccgacggtgcggcgagggtgatccttcgtcgc
gagacgctcgacgactatttgcggctggaggtgagctga
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