Gordonia otitidis: LK459_01880
Help
Entry
LK459_01880 CDS
T07915
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
goi
Gordonia otitidis
Pathway
goi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LK459_01880 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goi03400
]
LK459_01880 (xth)
Enzymes [BR:
goi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LK459_01880 (xth)
DNA repair and recombination proteins [BR:
goi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LK459_01880 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UEA59670
LinkDB
All DBs
Position
complement(427211..428056)
Genome browser
AA seq
281 aa
AA seq
DB search
MPTAITTVNVNGIRAATKVRSDSNPGFVPWVRSAGTDIVLLQEVRATEDQTRDVLAPLLD
DGWHLAMTESVVKGHAGVGVLSRMEPSAVRVGFGSDEFDSTGRYLEADLDTESGAVTVAS
LYLPKGAAVPTSASSEKEAEKFAEKKRFLDAFGSHLGSLARKRRPVMVGGDWNIAYAEHD
IKNWKGNLRSPGFLPHEREWVGGLLASGWSDVMRDLHPDVDGPYSWWSWRGKAFDNDAGW
RIDYHLANKAMATRVSKAFVDRADAYDRRWSDHAPVTVIVD
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgccaactgcgatcaccacagtgaatgtgaacggcatccgtgcggcgacgaaggtgcgc
tcggatagcaacccgggattcgtcccgtgggtgcgctcggccggaaccgacatcgttctc
ctccaggaggttcgcgccaccgaagaccagaccagagacgtcctcgcgccgctgctcgac
gacggttggcacctggcgatgaccgaatcggtcgtcaagggccatgcgggcgtcggggtg
ctcagcaggatggagccctctgcggtccgggtgggattcggtagcgacgaattcgactcc
accggaaggtatctcgaagccgatctggataccgagagcggtgcggtcaccgttgcgagt
ctctatctgcccaagggtgcggcggttccgacgtcggcgtcgtcggagaaggaggcggag
aagttcgccgagaagaagcgcttcctggacgccttcggttcccacctcggatcgctggct
cggaagaggcgtccggtgatggtcggcggcgactggaacatcgcatatgccgagcacgac
atcaagaactggaagggcaatctgcggagcccggggttcctgccccatgagcgcgagtgg
gtcggcgggctgctcgcgtcgggatggtccgatgtgatgcgagacctccatccggacgtc
gacgggccgtactcgtggtggtcatggcgcggaaaggcattcgacaacgacgccggttgg
cggatcgactatcacctcgccaacaaggcgatggccacgcgtgtgtccaaggccttcgtc
gatcgcgccgatgcctacgaccgacggtggtccgatcacgccccggtgaccgtcatcgtc
gactga
DBGET
integrated database retrieval system
