KEGG   Gordonia otitidis: LK459_06425
Entry
LK459_06425       CDS       T07915                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
goi  Gordonia otitidis
Pathway
goi00521  Streptomycin biosynthesis
goi00523  Polyketide sugar unit biosynthesis
goi00525  Acarbose and validamycin biosynthesis
goi00541  Biosynthesis of various nucleotide sugars
goi01055  Biosynthesis of vancomycin group antibiotics
goi01100  Metabolic pathways
goi01110  Biosynthesis of secondary metabolites
goi01250  Biosynthesis of nucleotide sugars
Module
goi_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:goi00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    LK459_06425 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    LK459_06425 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    LK459_06425 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    LK459_06425 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    LK459_06425 (rfbB)
Enzymes [BR:goi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     LK459_06425 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD RmlD_sub_bind NAD_binding_4 Polysacc_synt_2 NAD_binding_10 adh_short NmrA
Other DBs
NCBI-ProteinID: UEA60484
LinkDB
Position
1409079..1410083
AA seq 334 aa
MRVLVTGGAGFIGANFVLRTLEQRPDVQLRVLDKLTYAASPSTLAPVADSIDLVEGDIAD
AALTDRLVADADLVVHFAAESHNDNSLADPSAFVQTNLVGTYTLLEAVRRHDVRYHHIST
DEVYGDLDLDDPARFTESTPYNPSSPYSSTKAGSDLLVRAWVRSFGVPATISNCSNNYGP
YQHVEKFIPRQITNVLSGVRPKLYGDGRNVRDWIHVDDHNDAVWTIVEKGQIGETYLIGA
DGEVDNRTVVETILELLGQPRDAFDFVTDRPGHDRRYAIDSTRLRTELGWSPRYTDFRSG
LSATIDWYRDNAGWWQPAKDGVEQKYAVTKKVVG
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgcgggttctggtcaccggtggagccgggttcatcggcgcaaacttcgtgctccgcaca
ctcgagcagcggcctgacgtgcagttacgcgttctggacaagctcacatacgcggctagt
ccgtcgacccttgcacccgtcgccgacagcatcgacctcgtggagggcgacatcgccgac
gcggcgctcaccgaccgtctcgtcgccgacgccgacctcgtcgtgcatttcgccgcggag
tcgcacaacgacaactcgcttgccgacccgtcggcgttcgtccagaccaacctggtgggc
acgtacaccctgctcgaggcggtgcggcgccacgacgtgcggtatcaccacatcagtacc
gacgaggtctacggcgacctcgacctcgacgacccggcgcgcttcaccgaatccaccccg
tacaacccgtcgagcccgtacagctcgaccaaagcgggcagtgacctgctggtgcgggcg
tgggtgcgctcgttcggcgtgcccgcgaccatctcgaattgctccaacaactacgggccg
tatcagcacgtcgagaagttcatcccccgccagatcaccaatgtgctctccggggtgcgc
ccgaagctgtacggcgacggacgcaacgtgcgcgactggattcacgtcgacgaccacaac
gatgccgtctggacgatcgtcgagaaggggcagatcggcgagacctacctgatcggcgcc
gacggcgaggtcgacaaccggaccgtcgtcgaaaccatcctcgaactgctcgggcagccc
cgggacgccttcgacttcgtcaccgaccggccaggacacgaccgccgatacgccatcgat
tcgacgcgcctgaggaccgaactgggctggtcaccgcgttataccgacttccggtccggc
ctgtcggcgacgatcgactggtaccgcgacaacgcaggctggtggcagccggccaaggac
ggcgtcgagcagaagtacgcggtcaccaagaaggtcgtcggctga

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