Gordonia otitidis: LK459_07150
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Entry
LK459_07150 CDS
T07915
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
goi
Gordonia otitidis
Pathway
goi03030
DNA replication
goi03430
Mismatch repair
goi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LK459_07150
03430 Mismatch repair
LK459_07150
03440 Homologous recombination
LK459_07150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
goi03032
]
LK459_07150
03400 DNA repair and recombination proteins [BR:
goi03400
]
LK459_07150
Enzymes [BR:
goi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LK459_07150
DNA replication proteins [BR:
goi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LK459_07150
DNA repair and recombination proteins [BR:
goi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LK459_07150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
DNAX_ATPase_lid
RuvB_N
AAA_30
AAA_19
AAA_16
AAA_14
Rad17
Mg_chelatase
AAA_18
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UEA60610
LinkDB
All DBs
Position
complement(1570335..1572623)
Genome browser
AA seq
762 aa
AA seq
DB search
MALYRTYRPATFAEVVGQEHVTDPLSRALDGNRINHAYLFSGPRGCGKTSSARILARSLN
CEQGPTSTPCGVCSSCVALAPGGPGNLDVIELDAASHGGVDDTRELRDRAFYAPSESRYR
VFIVDEAHMVTNAGFNALLKIVEEPPEHLIFVFATTEPEKVLPTIRSRTHHYPFRLLAPP
VMRGLLENICAKEGVVVAPDVYPLVIRAGGGSPRDSLSILDQLLAGASDEGVTYDRALAL
LGVTDIALIDDAIDALAASDGSALFATVEKVVDAGHDPRRFAVDLLERLRDLILLQAVPD
AAERGLVEAPGDQLARMQGQIEHLGPGGLTRFAEIVHEALGEMRGTTSPRLLLEVMCARM
LLPAVSADDAALLQRLERLESGVAPAGGNAGGATPSASARAEGAPTAAPAPPPVDPPKYV
RPSQRKTTDGAPQPTQAAATPTGATRATGAAAPTPAAAPAAAQPPTDPTTPVAPTAPPAA
QERPVVAEPTRPIPKREDAPTSTSPAAAEPAADTVTAPEPAVVPAQTPPVSIVDDDIPLP
DEPVDDFEAPIPDDGRSATPRTVEPEPQSEPEPQTGLDVESARKRFQEVRAAVRERSKSL
EPMLSNAVIDEIRDNTVVLAHPIEVLVGRLSAPHAVGIMREAFAEVFGTDLDVATVHKVV
DVSAPAKNAAAQPDRQQRRTQTFARPSRARSTSDGQAEAAAAPEVPDEPEEPEPPRSDDE
IPDSERAEMVAEVQNATPEGRFDPNKVAMELLQTELGARPLE
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
gtggctctgtatcgcacctatcgtccggcaaccttcgccgaagtcgtcggtcaggagcac
gtcaccgatccgctgagccgtgctctcgacggaaaccgcatcaatcacgcgtacctgttc
tccgggccacgtgggtgtggcaagacgtcgtcggctcgcatcctggcgcgctcgctcaac
tgcgagcagggcccgacgtcgacgccgtgtggtgtctgctcctcgtgtgtcgccctcgcc
ccgggcgggccgggcaatctcgacgtcatcgaactcgacgccgcgagtcacggcggcgtt
gacgacacccgtgagctgcgcgaccgcgccttctacgccccgtccgagtcgcggtaccgc
gtgttcatcgtcgacgaggcgcacatggtcaccaacgcgggcttcaatgcgttgctcaag
atcgtggaggagccgcctgagcacctgatcttcgtgttcgccaccaccgagccggagaag
gtcctgcccaccatccgctcacgtacacaccactatccgttccggctcctcgcgccgccg
gtgatgcgcgggctgctcgagaacatctgtgccaaagagggcgtcgtcgtagcacccgac
gtctacccgctggtcatccgtgcgggcggtggttcgccacgtgactcgctgtcgatcctc
gatcagctacttgccggagcatcggacgagggagtcacctacgaccgcgccctcgcactc
ctcggcgtcaccgacatcgccctcatcgacgacgccatcgacgcactcgccgcctccgac
ggctccgcgctgttcgcgacggtcgagaaagtcgtcgacgccggacacgatccccggcgc
ttcgctgtcgacctactcgaacgactgcgcgatctcattctgctgcaggcagttcccgat
gccgccgagcgcggcctggtggaggcgcccggcgatcagctcgcacgaatgcagggccag
atcgagcatctcggtcccggcggcctcacccgcttcgcggagatcgtgcacgaggcgctc
ggcgagatgcgtggcaccacctcgcctcgcctgctcctcgaggtgatgtgcgcgcggatg
ctgctccccgccgtctccgccgacgacgccgcgctgctccagcgcctcgaacgactcgag
tcgggcgtcgctccggcaggtggtaatgccggtggtgcaacaccttcggcatccgcgcgc
gccgagggtgcccccactgcggcgcccgccccgccgccggtcgatccgcccaagtacgtg
cgcccctcgcagcgaaagacaaccgacggggcgccgcagcctactcaggccgccgcgacg
ccgaccggcgcgacccgcgcgaccggcgcggctgccccgacgcctgcggcagctccggcc
gctgcgcagccgccgactgacccgaccactccggttgccccgaccgccccgcccgctgcg
caggaacgacccgtcgtcgccgagccgacgcgcccgatacccaagcgcgaggatgcgcct
acctccacatcgcctgcagcagctgaacctgcggctgacacggtgactgcgcctgaaccg
gctgtggtgccggcgcagacaccgccggtatcgatcgtcgacgacgacatcccactgccg
gatgagcccgtcgacgatttcgaggcacccatccccgacgatggtcgttcggcgacgccg
cggacggtcgaacccgaaccgcagtcagaacccgagccccagacgggcctcgacgtcgag
tcggcgcgcaagcgtttccaggaagtccgcgctgcggttcgagaacgttcgaagagcctc
gagccgatgctgtcgaatgcggtgatcgacgagattcgcgacaacacagtcgtgctcgca
catccgatcgaggtgctcgttggtcggctgtcggcaccgcacgccgtcggcatcatgcgc
gaggcattcgccgaggtgttcggcaccgatctcgacgtagcaacagtgcacaaggtcgtc
gacgtcagcgcgccggcgaagaacgctgctgcgcaacccgatcgacagcagcgtcggact
cagacgttcgcgcggccgagtcgtgcacgctcgacgtcagacggtcaggcagaagcggcc
gcggcgccggaggttccggacgagcccgaggagcccgagccgccccgctccgacgacgag
atccccgactccgaacgcgccgagatggtcgccgaggtgcagaacgccacgcccgaaggt
cgattcgaccccaacaaggtcgcgatggagctactgcagaccgaactgggcgcccggccg
ctggagtga
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