Gordonia otitidis: LK459_11865
Help
Entry
LK459_11865 CDS
T07915
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
goi
Gordonia otitidis
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
goi03021
]
LK459_11865
Transcription machinery [BR:
goi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LK459_11865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Sigma70_ECF
HTH_23
KORA
HTH_Crp_2
HTH_3
MarR
DUF7343
HTH_24
HTH_10
DUF134
GerE
Motif
Other DBs
NCBI-ProteinID:
UEA57340
LinkDB
All DBs
Position
2605986..2606771
Genome browser
AA seq
261 aa
AA seq
DB search
MTPAPTVESGDHPDDYSDVVDMLGEMRAHRDPVRRAVIRDEVVSRCLPLAENIARRFADR
GENFDDLLQVARLGLLNAVDRFDPALGTSFLAFAVPTMMGEVKRHFRDVMWSMRVPRRAK
DASLDITRAADDLVQRLGRSPRPSELAEFLDLPVSDVVDGLLARSAYTSVSIDAESGQTS
SLADRLGHDDPELTRVDESVTLRPALERLSERERRILSLRFFRSMSQSEIAAEIGISQMH
VSRLLAKALEALRASLSETDN
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
ttgactcctgctccgacggtcgagtcgggtgatcacccggacgactactccgatgtcgtc
gacatgctcggtgagatgcgggcgcaccgtgacccggtccggcgcgcggtcatccgcgac
gaggtcgtctcgcggtgtctgcctctcgccgagaacatcgctcgccgattcgccgatcgt
ggagagaacttcgacgacctactgcaggttgcgaggctgggactcctcaacgccgtcgac
cgtttcgatcccgcgctggggacaagttttctggctttcgcggtgcccacgatgatggga
gaggtgaaacggcacttccgtgacgtgatgtggtcgatgagagtgccgcggcgggccaag
gatgcctcactcgacatcacgagagccgccgacgatctggtgcagcggctcggtcgctca
cctcgtccgagtgaactggccgagttcctcgacttgcccgtatccgacgtcgtcgatggg
ttgttggcgcggtcggcctacacctcggtgtccatcgacgcggaatccggacagacgtcg
tcgctcgccgatcgactcggccacgacgatcccgaactgacgcgcgtcgacgagtccgtg
acccttcggccggcgctggagcgcctgtcggagcgggagcgccgcatcctgtcgttgcga
ttcttcaggtcgatgtcgcagagcgagatcgccgcggagatcggaatctcccagatgcat
gtctcccggctgctggcgaaggctctcgaggcgctgcgcgcatcactctccgagaccgac
aactga
DBGET
integrated database retrieval system
