Gordonia otitidis: LK459_13105
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Entry
LK459_13105 CDS
T07915
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
goi
Gordonia otitidis
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
goi03110
]
LK459_13105 (clpB)
Chaperones and folding catalysts [BR:
goi03110
]
Heat shock proteins
HSP100
LK459_13105 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
Sigma54_activat
AAA_16
nSTAND3
ATPase_2
AAA_28
Mg_chelatase
AAA_7
IstB_IS21
AAA_18
bpMoxR
TniB
T2SSE
NACHT
Zeta_toxin
NBD_SMAX1
AAA_19
HOOK
AAA_25
Torsin
FTA4
DNA_pol3_delta2
Fez1
AAA_6
Motif
Other DBs
NCBI-ProteinID:
UEA57559
LinkDB
All DBs
Position
2859423..2861975
Genome browser
AA seq
850 aa
AA seq
DB search
MDSFTPTTKTQQALSAAVQAAAAAGNPDVRPAHILVALLDQSDGIASPLLKAVGVNPSTV
RAQAQAMVDRAPTVSSASAQPQLSRESIAAVTAAQQLATELNDEYVSTEHLVVGLATGDS
DVAKLLHDNGATPQALQEAFVAVRGTARVTSEDPESTYQALEKYSTDLTAAAREGKLDPV
IGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVEGDVPESLRNKTVVSL
DLGSMVAGAKYRGEFEERLKAVLDEIKGSAGQVITFIDELHTIVGAGATGDSAMDAGNMI
KPMLARGELRLVGATTLEEYRQYIEKDAALERRFQQVYVGEPSVEDAIGILRGLKERYEV
HHGVRITDSALVAAASLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERVV
RRLEVEEVALEKEHDEASKQRLEKLRQELADQKEKLNELSARWQSEKTAIDAVRDTKEEL
ERLRGEADRAERDGDLGRAAELRYGKIPGLEKELEAAIEKTGTDPDEDVMLQEEVGPDDV
AQVVSAWTGIPAGKMLEGETAKLLRMEEELGKRVIGQKEAVVAVSDAVRRARAGVADPNR
PLGSFLFLGPTGTGKTELAKALAEFMFDDERAMVRIDMSEYGEKHAVARLVGAPPGYVGY
EQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTILIL
TSNLGAGGDRDQVMAAVRSAFKPEFINRLDDVVIFEALSPEELVSIVDIQLGQLQKRLAQ
RRLELQVTPKAKEWLAERGFDPLYGARPLRRLVQQAIGDQLAKALLAGDVRDGDVVPVNV
SADGDSLVLG
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
gtggacagcttcaccccgaccaccaagacgcagcaggcgttaagcgctgctgtgcaggcg
gcggccgctgctggtaaccccgacgtacgtccggcccacatcctggtcgcactgctggac
cagtccgacggcatcgcttcgccgctgctcaaggcggtgggcgtgaatccgtcgactgtt
cgcgcgcaggcgcaggccatggtcgatcgggcgccgacggtgtcgagtgccagtgctcaa
ccgcagctttcccgcgagtcgatcgcggcggtcacggccgcccagcagctcgccaccgaa
ctcaacgacgagtacgtctccaccgagcacctcgtcgtcgggctcgccaccggcgattcc
gatgtcgccaagctgctgcacgacaacggcgcaaccccgcaggctctgcaggaggcgttc
gtcgccgtccgcggaacggcgcgcgtgacgtcggaagaccccgaatccacctaccaggca
ttggagaagtactccaccgacctgaccgctgccgcccgcgagggcaagctcgatccggtc
atcggccgcgattccgagatccgtcgtgtggtgcaggtgctcagccgtcgtaccaaaaac
aacccggtcctcatcggtgagcccggcgtcggcaagaccgccatcgtcgaggggctcgcg
cagcgcatcgtcgaaggtgacgtgccggagtcgttgcgcaacaagaccgttgtgtcgctg
gacctcggatcgatggtcgcgggtgcaaagtaccgcggtgagttcgaggagcggctgaag
gccgtgctcgacgagatcaaggggtcggccgggcaggtcatcaccttcatcgacgagctg
cacaccatcgtgggtgccggtgccacaggcgattccgccatggacgcgggcaacatgatc
aagccgatgctcgctcgcggtgagttgcgcctggtcggtgcgacgacgctggaggaatac
cgccagtacatcgagaaggacgccgccctcgagcgtcggttccaacaggtgtacgtcggg
gagccgagcgtcgaggacgccatcggcatccttcgtggcctgaaggaacggtacgaggtg
catcacggtgtgcgcatcaccgactccgcgttggtcgctgccgcaagcctttccgatcgc
tacatcacctcgcgcttcctgcccgacaaggccatcgacctcgtcgacgaggctgcgtca
cgtctgcggatggagatcgactcgcgccccgtcgagatcgacgaggtcgagcgtgtcgtc
cgacggctcgaggtcgaggaggtcgcactcgagaaggagcacgacgaagcgtcgaagcaa
cgtctcgagaagctgcgtcaggaactggccgaccagaaggagaagctcaacgagctctcc
gcgcgctggcagtcggagaagaccgccatcgacgccgttcgcgacaccaaggaagagctc
gaacgccttcgtggagaagcggatcgggccgaacgcgacggtgatctgggtcgggcggcc
gagcttcgctacgggaagatccccggcttggagaaggagttggaagccgcgatcgagaag
accggcaccgaccccgacgaggacgtgatgctgcaggaggaggttggccccgacgacgtc
gcacaggttgtgtcggcgtggacgggcattcccgcgggcaagatgctcgagggtgagacc
gccaagctgctgcgcatggaagaggaactcggcaagcgcgtcatcggccagaaagaggcc
gtggtcgccgtgtccgacgccgtccgacgtgctcgtgcaggcgtcgccgacccgaaccgg
ccactgggatcgttcctgttcctgggcccgaccggcaccggtaagaccgagctggccaag
gcgctggcggagttcatgttcgacgacgagcgcgcgatggtgcgcatcgacatgagtgag
tacggcgaaaagcatgccgtggcaaggcttgtcggtgcacctcccggctatgtcggatac
gagcagggcggtcagctgaccgaagcggtacgtcgccgtccgtatacggtggtgctcttc
gacgaggtcgaaaaggctcacccggacgtcttcgacatcctgctgcaggtgctcgacgag
ggtcgactcaccgacggccagggacgcacggtcgacttccgcaacaccatcttgatcctg
acgtcgaacctgggtgcaggaggcgaccgggaccaggtgatggcggcggtgcgcagcgcg
ttcaagccggagttcatcaaccgactcgacgacgtcgtgatcttcgaggcgctcagcccc
gaggagctggtgtcgatcgtcgacatccagctcggccaactgcagaagcgtcttgctcag
cgtcgactcgaactgcaggtcacgccgaaggcgaaggaatggctggccgagcggggattc
gatccactctacggcgcccgtccgctacgtcgcctggtgcagcaggccattggcgatcag
ctcgccaaggcgttgctcgccggtgatgtccgcgacggcgacgtcgtgccggtcaacgtg
agcgccgatggagattcgttggttctcggctga
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