Gordonia otitidis: LK459_13980
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Entry
LK459_13980 CDS
T07915
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
goi
Gordonia otitidis
Pathway
goi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LK459_13980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goi03400
]
LK459_13980
Enzymes [BR:
goi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
LK459_13980
DNA repair and recombination proteins [BR:
goi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LK459_13980
Prokaryotic type
LK459_13980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UEA57722
LinkDB
All DBs
Position
complement(3047558..3048451)
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AA seq
297 aa
AA seq
DB search
MPFSLPPQVLLGWFDANERDLPWREPGLSGWQILISEIMLQQTPVSRVVEPWREWVRRWP
VPSAMAAASPGDVLRAWGKLGYPRRALRLHECARVLSTEHDDVVPADVATMLTLPGIGDY
TARAVACFAYGQAVPVVDTNVRRVVARAVHGRAEPGNPSKRDLADADALLPRDVDGDYAS
SAPRFSAALMELGALVCTARKPDCGACPLTCAWVEAGRPAHAGPPRRVQKFAGTDRQVRG
LLLDVLRGTDEPVVRDRLDVVWLTDTAQRDRALDSLLVDGLVEITADGRFCLAGEAG
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttagtctgccacctcaagtgctcctgggttggttcgacgccaacgaacgcgac
ctcccgtggcgcgagcccgggctctccggctggcagatcctcatcagcgagatcatgctc
cagcagaccccggtctcgcgggtcgtcgaaccatggcgcgagtgggtgcgacgttggccc
gtaccgtcggcgatggcagcggcatcacccggcgacgtgctgcgcgcgtggggcaagctc
ggttacccgcggcgcgcgctgcggctgcacgaatgtgcgcgcgtgctctccaccgaacac
gacgacgtcgtgcccgccgacgtcgcgacgatgctcaccttgccgggcatcggcgactac
acagccagggccgtggcctgtttcgcgtacggacaggccgtccccgtcgtagacaccaac
gtccgtcgtgtggtcgcccgagcggtccacggacgtgcggagcccggcaatccgtcgaag
cgggatctcgccgacgcagacgccctgctcccccgggatgtcgacggcgactacgcgtcc
tcggctccgcgtttcagcgctgcactcatggagctcggcgctctcgtctgcaccgcccga
aagcccgattgcggggcgtgcccgctgacctgcgcctgggtcgaggcaggcagacccgcg
cacgcggggccgccccggagggtgcagaagttcgcgggcaccgaccgccaggttcgcggc
ttactgctcgacgttctacgcggcaccgacgagccggtcgtacgtgacaggctcgacgtc
gtctggctgaccgacaccgcccagcgcgaccgcgcactcgactcactgctggtcgacggg
ctggtcgagatcactgccgacggtcgtttctgcctggcaggcgaggcgggatga
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