Gordonia otitidis: LK459_14005
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Entry
LK459_14005 CDS
T07915
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
goi
Gordonia otitidis
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goi03400
]
LK459_14005 (radA)
DNA repair and recombination proteins [BR:
goi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LK459_14005 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DUF7125
ChlI
DnaB_C
AAA_22
AAA_30
AAA_16
Lon_C
AAA_19
DUF7129
nSTAND_NTPase5
AAA
Cas12f1-like_TNB
GvpD_P-loop
Zn_ribbon_8
NACHT
Zn_ribbon_3
nSTAND3
AAA_29
NTPase_1
ABC_tran
RecA_N
AAA_14
SLFN-g3_helicase
AAA_24
DZR
NPHP3_N
AAA_5
Zn_ribbon_6
MCM
AAA_18
Zn_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
UEA57727
LinkDB
All DBs
Position
complement(3051940..3053325)
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AA seq
461 aa
AA seq
DB search
MAKPKSSYRCSACGHTVAKWVGRCPECGEWGTVDEVAALPSATASHSAVAPSSPAVPITQ
VDAASSNAIPTGIGEFDRVLGRGVVPGSVILLAGEPGVGKSTLLLETVKHWARSGRTALY
LTGEESAGQVRLRAERTDAVHENVYLAAETDLATVLGHVDAVRPSLLVVDSVQTMVATGT
DGVTGGVTQIRAVTTALVSLAKNRGIAVILVGHVTKDGAVAGPRSLEHLVDVVLSFEGDR
HTSLRMVRGIKNRFGSADEVGCFEQRSDGIHQVTDPSGLFVHHHDSDVSGSSAIVAMDGK
RALVGEIQALLADSKMANPRRAVSGLDSARASMVLAVLQGRSGLPLGEREVYLSTVGGMK
VTEPAADLGIALAVNSFIKNKPTPRTTVAIGEVGLAGEVRRVSAVGRRVAEAKRLGFTHA
IIPAGSDDQLPEGIRITRVSVLADAMRAAFVTPVDASRAPF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaacccaagtcgtcgtaccgttgctcggcctgcggccataccgtcgccaaatgg
gtcggccgatgtccagaatgcggcgaatggggcaccgtcgacgaggtcgcggctctgccg
tcggccaccgcatcgcacagcgccgtcgcaccgtcgagtccggcggttcccatcacccag
gtcgacgccgcctcgtcgaatgcgatcccaacgggcataggcgaattcgaccgcgtactc
ggccgcggtgtggtcccggggtcggtgatcctactcgcgggcgagccgggggtcgggaag
tcgacgttgcttctcgagaccgtcaagcactgggctcgcagtgggcgtaccgcgttgtac
ctgaccggcgaggagtccgccgggcaggttcggctgcgcgcggagcgcaccgacgctgtc
cacgaaaacgtctatctcgcagccgaaaccgacctcgcgaccgtactcggccacgtcgac
gccgtccgaccctccctcctcgtggtcgattcggtacagacgatggtcgccaccggaacc
gacggcgtgaccggcggggtgacgcagatccgcgcggtcaccacggcactcgtctcgctg
gccaagaaccgcgggatcgccgtcatcctcgtcgggcatgtcaccaaagacggcgcggtc
gccggaccgcggtcgctcgagcatctcgtcgacgtcgtgctgtcgttcgagggcgaccgc
cacacgtcgctgcgcatggtccgcggcatcaagaaccgtttcggttccgccgacgaggtc
gggtgtttcgagcagcgctccgacggcatccaccaggtcaccgatccgtcgggactcttc
gtgcaccaccacgattcggacgtgagcggttcgtcggcgatcgtcgcgatggacggcaag
cgcgctctggtcggtgagatccaggcgttgctcgccgactcgaagatggccaacccacgg
cgtgcggtgtcaggtctcgactccgcgcgtgcctcgatggtcctcgcggtgctgcagggt
cggtccgggctgcctctcggcgaacgagaggtctacctgtcaaccgtcggcggcatgaag
gtcaccgaacccgccgccgacctcgggatcgcgctcgcggtgaactccttcatcaagaac
aagccgacgccacgtaccacggtcgcgatcggcgaggtgggtctcgcgggtgaggtgcgt
cgtgtctccgcggtcgggcgtcgggtggcggaggccaaacgattgggtttcacgcacgcg
atcatcccggcaggctcagacgatcagcttcccgagggcatcaggatcacccgcgtctca
gtgctcgccgacgcgatgcgtgcagcattcgtcaccccggtcgacgcctcccgcgccccg
ttctga
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